LOCUS ABE40120.1 812 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Lon-A peptidase. Serine
peptidase. MEROPS family S16 protein.
ACCESSION CP000283-2880
PROTEIN_ID ABE40120.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2892"
/transl_table=11
/db_xref="InterPro:IPR001270"
/db_xref="InterPro:IPR001984"
/db_xref="InterPro:IPR003111"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="InterPro:IPR004815"
/db_xref="InterPro:IPR008268"
/db_xref="InterPro:IPR008269"
/db_xref="InterPro:IPR011704"
BEGIN
1 MTATKPRPTI VFGESHSYPV LPLRDIVVFP HMIVPLFVGR EKSIRALEEV MKNDALIMLA
61 TQKNASDDDP APGSIYEIGT LASVLQLLKL PDGTVKVLVE GLARAKVENY TDRTEYYEAQ
121 AQSIADTDAT SVEAEALSRS VVSDFESYVK LNKKISAEVV GVVQSITDFA KLGDTVASHL
181 AVKIADRQGI LETLSVTARL EKVLGLMESE ISVLQVEKRI RSRVKRQMEK TQREYYLNEQ
241 MKAIQKELGD DEGRDELADL EEKIAKTKLS KEAREKAQHE LKKLRQMSPM SAEATVVRNY
301 LDWLLSIPWN KKSKVKKDLE AAQATLDSDH YGLEKVKERI VEYLAVQSRA NKLSGPILCL
361 VGPPGVGKTS LGKSIAKATG REFVRVSLGG VRDEAEIRGH RRTYIGSMPG KIIQSMRKAK
421 TSNPLFLLDE IDKMGADFRG DPSSALLEVL DPEQNSTFND HYLEVDYDLS NVMFITTANT
481 LNIPGPLMDR MEIIRIAGYT ENEKVEIARK HLIPLALTKH GLDSKEWSID DDALLLMIRR
541 YTREAGVRNL ERELSTLARK AVKDLMLSKK KSVKVTEKSI EEYLGVPKFR FGEIELEDQV
601 GVVTGLAWTD VGGELLTIES VMMPGKGRMT VTGNLRDVMK ESISAAASYV RSRAITFGIE
661 PPFFERRDIH VHVPEGATPK DGPSAGVAMA TTIVSVLTGI PIRRDIAMTG EITLRGRVLP
721 IGGLKEKLLA AARGGIKTVL IPEDNAKDLT EISDAIKGGL HIIPVARMDE VIANALVRAP
781 VPIVWEEETP SKLPGKPESQ EGDEAAGGLT AH
//