LOCUS ABE40093.1 439 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 prolyl-tRNA synthetase protein.
ACCESSION CP000283-2853
PROTEIN_ID ABE40093.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2865"
/transl_table=11
/db_xref="InterPro:IPR002314"
/db_xref="InterPro:IPR002316"
/db_xref="InterPro:IPR004154"
/db_xref="InterPro:IPR004500"
/db_xref="InterPro:IPR006195"
BEGIN
1 MRLSRFFLPI LKENPKEAEI VSHRLMLRAG MLRQEAAGIY AWLPLGHRVL KKIEQIVREE
61 QNRAGAIELL MPTLQLADLW RESGRYDAYG PEMLRIADRH KRELLYGPTN EEMITEIFRA
121 YVKSYKSLPL NLYHIQWKFR DEQRPRFGVM RGREFLMKDA YSFDVDEAAA RKSYNRMFVA
181 YLRTFARMGL KAIPMRAETG PIGGDLSHEF IVLAETGESG VYCDRDVLNL PVPGEDVDYD
241 GDLTPIIQQW TSVYAATEDV HDAARYESEV PEANRLNTRG IEVGQIFYFG TKYSDSMKAN
301 VAGPDGADAP IHGGSYGVGV SRLVGAIIEA CHDENGIKWP EEVAPFRVAI LNLKQGDAQT
361 DAACEQLYRE LAAKGVDVLY DDTDQRAGAK FATADLIGIP WQVLVGPKGL ADGKVELKRR
421 SDGSRETIAL AEAVARLAP
//