LOCUS ABE40077.1 844 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 surface antigen (D15) protein.
ACCESSION CP000283-2837
PROTEIN_ID ABE40077.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2849"
/transl_table=11
/db_xref="InterPro:IPR000184"
/db_xref="InterPro:IPR010827"
BEGIN
1 MNAGMRVLRG GILAALVFFA VPVATTATAV LTASPAAAQS ASSIQVEGNR RVEADTIRSY
61 FKPGPSGRLD QGSIDDGLKA LIETGLFQDV RINQGGGGRL VVSVVENPVI GRLAFEGNKK
121 IKDEQLSAEI QSKPRGTLSR PMVQSDALRI AEIYRRSGRY DVRVDPQIIE QPNNRIDLVF
181 VVDEGAKTGV KSIEFIGNQA YSSYRLKDVI KTRESNLLSF LGSGDVYDPD RVEADRDLIR
241 RFYLKNGYAD VQVVAALTEY DPGRKGFLVT FKIEEGQQYR VSSVTFDSAI PNFDANSLRS
301 YSRVSVGSLY NAEALEKSVE EMQIEMSRRG YAFATVRPRG DRNFESHTVS IAFSIEEGPR
361 VYIERINLLG NTRTRDYVIR REFDLSEGDA YNRALVDRAE RRLKNLDFFK SVKITTEPGS
421 SSDRVILVVN LEEKSTGDFS VSGGYSTSDG ALGEVSVSER NFLGRGLFAK ATVQYGQYAR
481 GYSLSFVEPY LLDYRVALGL DLYQREQLAN RYISYGTKTL GISPRLGFAL REDLSLQLRY
541 SLYRQEITLP GYLNNCNNNF GTVAYNPTPQ YMNFIANNPN GNPGLGCLGD GEASLPVRIG
601 LSNAAYWTSS IGYTLTYNTL DNTRNPTNGL LVDFRQDFAG LGGDVKFIKS AFDAKYYTPL
661 VSEVVGIIRL QAGNLSSYGD NQLRMLDHFQ MGPNLVRGFA PNGIGPRDIG QYAFYGYGGD
721 ALGGTNYWGA SVEMQMPFWF LPKEVGLKGA VYADAGSLFD YKGPTSWTLT NEVNGAGCSK
781 ATETSIGSCA GLNYDDTNLV RTSVGVGLIW ASPFGPLRFD YAIPITKGKY DRVQEFKFGG
841 GTTF
//