LOCUS ABE39819.1 480 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 nitrogen metabolism transcriptional
regulator, NtrC, Fis family protein.
ACCESSION CP000283-2579
PROTEIN_ID ABE39819.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2590"
/transl_table=11
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR010114"
BEGIN
1 MPAGSILVAD DDTAIRTVLN QALSRAGYEV RLTGNAATLW RWVSQGEGDL VITDVVMPDE
61 NAFDLLPRIK KMRPNLPVIV MSAQNTFMTA IRASEKGAYE YLPKPFDLKE LIAIVGRALA
121 EPKERSSNQT DENEFDSIPL VGRSPAMQEI YRVLARLMQT DLTVMISGES GTGKELVARA
181 LHDYGKRRNG PFVAVNMAAI PRDLIESELF GHERGAFTGA NTRASGRFEQ AEGGTLFLDE
241 IGDMPMEAQT RLLRVLQQGE YTTVGGRTPI KTDVRIVAAS NKDLRILIQQ GLFREDLFFR
301 LNVVPLRLPP LREHIEDLPD LVRHFFALAE KDGLPAKKLD SAALERLKQH RWPGNVRELE
361 NLARRLAALY PQDVITASVI DGELAPPAVV SGGSVAHSVD NLGGAVEMYL SSHFSGFPNG
421 VPPPGLYHRV LREIEVPLLT AALAATRGNQ IRAADLLGLN RNTLRKKIRD LDIQVYRTGG
//