LOCUS ABE39807.1 522 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Type I secretion outer
membrane protein, TolC protein.
ACCESSION CP000283-2567
PROTEIN_ID ABE39807.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2577"
/transl_table=11
/db_xref="InterPro:IPR003423"
/db_xref="InterPro:IPR010130"
BEGIN
1 MSVARRPHRT SFTRRVKPGV PSSDCVPYCA MGLTSADAAR LISATVSWAT NRTAKLDARM
61 DGVKRFSGLV TAGIVLVCLG PAPVSAETIE SALIRAYQTN PQLNAQRASV RSTDEQVPQA
121 LSGYRPKVSI TASGGYQYTD VNSLFGGNQI HLSGSNYPRT VGATVSQTLF NGNQTANRTR
181 AAESQVSSAR EGLRVLEQSV LLSAATIYMD YLRDSATVEV QKSNVRVLEQ TLKQTNDRFN
241 VGEVTRTDVA QSQAQLAAGN TQLLTAESNL TTTRANYRRI IGSEPTGLAP GSPVDRFLPA
301 TLAQAVDLGL TENPNVTAAM FGIDVSYLNV KINEGALFPT VSLQANAQQG YEQSITSPRQ
361 FVASAIAQVS VPIFQGGAEY ALIRQSKESL SQQRLNLEQV RDQARASIVQ AWGQLQAGRA
421 QVASAQSQVK ASEIALNGVR EEARAGQRTT LDVLNAQQAL VNARVSLVTA QHDRVVASYA
481 VLSAVGRLAP QVLGLKTDIY DPSVHYQQVR DSWVGVRTPD GR
//