LOCUS ABE39782.1 750 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Penicillin-binding protein
1C protein.
ACCESSION CP000283-2542
PROTEIN_ID ABE39782.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2552"
/transl_table=11
/db_xref="InterPro:IPR001264"
/db_xref="InterPro:IPR001460"
/db_xref="InterPro:IPR009647"
/db_xref="InterPro:IPR011815"
BEGIN
1 MSEARPNPNV TEAEMSCPGR GAARSAAPQT RDPDSAADVA GAPDQQRTTP QGRRAALHPG
61 NGRLLRNAAV AVFLIVALSI GAIAAYVASL GPLPLDEARK TSVSVVDRHG KLLRAYAMTD
121 GRWRLPVDAK TGVDPRFLQQ LIAYEDKRFW SHHGVDPLAT GRAALQLVTR GRIVSGGSTI
181 TMQLARLMEP RRERSLGAKL RQMVRAVELE RKLGKHQILD LYLALAPYGG NLEGVRAASI
241 AYFGKEPKRL TLAESALLVA LPQSPETRRL DRHPDAARAA RDRVLARMVE DGVVSAEDAA
301 QARAAPVLRQ RKPMPVLAPH SADQAAASVK DAPVIRLTLD AGTQRALEAL ARDRATALGP
361 DISIGIVAVD NDSGDVLAHV GSADYFDDRR AGQVDMTRAV RSPGSTLKPF IYGLAFEDGF
421 VHPESLIDDR PVRFGAYAPE NFDMTFQGTV TVRKALQLSL NVPAIELLDR VGSSRLASRL
481 KQAGASLVLP KDEAPGLAMG LGGVGVRLID LVQLYSGVAR LGSVAPLREI ASKNNGERET
541 LRLLDKVAAW QIGNVLIGTP PPENAARNQI AFKTGTSYGY RDAWSVGFDG KITIGVWVGR
601 PDGAPVPGLI GRVAAAPVLF DAFGRTGQLR AALPKPPRGT LTASNTQLPL PLRRFRSAGE
661 LVRSGNEQAL RIQFPLNGSR IDAQSQASTG ALPVKVAGGV LPMTVMVNGL SAGEIDGRRQ
721 RLIAPPGPGF VRLTVMDAVG AADTVVVRIQ
//