LOCUS ABE39781.1 1737 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 alpha-2-macroglobulin-
like protein.
ACCESSION CP000283-2541
PROTEIN_ID ABE39781.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2551"
/transl_table=11
/db_xref="InterPro:IPR002890"
/db_xref="InterPro:IPR011625"
BEGIN
1 MIGWVRAITL CATLALGLAT AQAADKAFKR DELADSAIKL EAQIKSEAGA INKPAASLRT
61 DADAALRRGD YRTGLQIMGQ IATVDPADGS NWLRLAKTVF QIKAPTSSEQ TFLLERASTA
121 AYIAYQRAGN AGEEAEALAV LGRAMADRRL WRPALDALRL SLDLREVAEV RGRYEKLRED
181 HGFKLLDYTV DSDSASPRAC FQFSEDLAKR TDFAPYLALA GTDKPALTSE DKQLCVEGLK
241 HGERYNINLR AGLPSTVKET LPKSAEFNIY VRDRKPLVRF TGRAYVLPRT GQRGIPLVSV
301 NTPTVSVQLF RIGDRNLINT VVDSDFQRTL SRYQLDDLGS QRGAKVWSGE LDTAPAALNA
361 DVTTAFAVDQ VLGDLQPGVY VMTAAPKGPI ASSDDDGQLA TQWFIVSDLG LTAFSGNDGI
421 HVFVNSLAST DPVGKAEVRL IARNNEILAT RKTDESGHVL FEAGLARGEG GMSPALLTAT
481 GDKADYAFLS LKSNAFDLSD RGVTGRAVPA GADAFVYAER GVYRGSETVY LTALLREGQG
541 NAIVGGPMTL VIERPDGVEF RRAVLSDQGA GGRSLAVALN SAVPTGTWRV RAFTDPKGAS
601 IGETTFMVED YVPDRIEFDF SSKDKQIKAD APVELKVDGR FLYGAPASGL ALEGDLLVAP
661 AAGRPGFPGY QFGVADEETT SNERTPLENL PEADDNGSAT FPLVLPKPPS STRPQEAQIF
721 IRMREAGGRA VERKLVLPVA PASPMIGVKP LFADKNVADG DAAKFEVAFV DPDGAALTRS
781 GLRYELLKIE SHYQWYRQNS SWDFEPVKST KRVADGDLSV TPDKPGQLSF QPETGRYRLD
841 VKTADADGPI TSVQFDVGWY SDGSADTPDL LETSIDKPEY ASGDSMTVAV NARSAGLLTV
901 NVLGDRLLTT QSLAVKQGSS QVRIPVGKDW GSGAYVVTTL RRPLDAAAQR MPGRAIGVQW
961 VSIDKKARTL QVALSPPALV RPSTTLKLPV KLGGLAPGED AKIVVAAVDV GILNLTNYKP
1021 PAPDDYYLGQ RRMTSEIRDL YGQLIDGMQG TRGQIRSGGD AAGAELQGSP PTQKPLALYS
1081 GIVTVGADGA AEISFDIPEF AGTARVMAVA WTATKVGRAT IDVTVRDPVV LTTTLPRFLR
1141 NGDRGTMAFD LDNVEGAPGD FTVKVTANGP VKLNGPASTT MKLAAKQRGS AQLSVEAGGA
1201 GTATLDVAIS GPNGLTLARH YVLDVRPANQ TLARRAIRTL AKQESLTLTA DMFADLVPGT
1261 GGVSLSVSQS TALDAATILK ALDRYPFGCS EQIASRALPL LYVNDLAAGA HLAMDTSADE
1321 RIRTSIDRLL ARQGSNGSFG MWSSGGDDPW LDAYVTDFLT RAREKNFVVP DVAFRSALDR
1381 IRNAVVNAEE PEKDGGRNLA YGLYVLARNG AAPIGDLRYL ADTKLDKLAT PIAKSQLAAA
1441 LALVGDRTRA ERVYAAAAGD LAPKPVIQFG RVDYGSALRD AAALVSLASE GNAPKATLTT
1501 AVQRVEAARG LTPYTSTQEN AWLVLAARAL AKETMSLDVN GSALKSAVYR NYKAEEVRGQ
1561 PVRIANTGDS PVQAVVTVSG SPVTPEPAAS NGFKIERNYF TLAGEPADIT KAKQNDRFAV
1621 VLTVTEAKPE FAHVMIADYL PAGLEIDNPH LVSSGDSGTL DWIENGQEPV NTEFRDDRFT
1681 AAINRGTEDK AVFTVAYVVR AVSPGKYVLP QAIVEDMYNP SRYGRTGTGV VEVRAAK
//