LOCUS ABE39679.1 1243 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 conserved hypothetical
protein protein.
ACCESSION CP000283-2439
PROTEIN_ID ABE39679.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2449"
/transl_table=11
BEGIN
1 MPPQERILRV GAQSSLGDQA ATEHVHREAM ASYPSPRDSG QDSQSDEHVA RNWQDGGWDP
61 EPEEAGRHRA RKLLSRSNLG FHRVDESMRR WRHWLTDEPW LKRVAIAAVV VVLVLTAGFG
121 GLWLRLGAGP INLDMATPWL ANAIEENIGH GNTVEVGGTQ IEREGRIRIA VRIRDIVVRD
181 RDHVIVATAP KAEVRLSGWA LLMGKLRAES LRLVDAELAI RITPDGQVTV STGDTARPLA
241 TGVASARRPP EFTLPGQAPN TAAPSGQGDA ALPAPLGKPA TTDGDDGMKS LLAGLDWLDS
301 LSLTGLDGQN LNEIGLKNGN LVVDDQQRGN RWNFENISLS LRRPTRGGVA LSVGEEGAKA
361 WSLRVLVGPA QDGVRSVELH ANQVPTRNIL LALRVKNLTY GADFPLTGDL KGELGRDGLP
421 TYFRGKLVAG AGTVIDYDTP DYPMAIDQAE FNFEWDANRR VLVAPLKVIA GANRVTLLAS
481 VEPPNGNAAD WRLNLSGGTI VLPGAADEAP LIFNRIAVRV RFDTDNRRVL LTQADISNGE
541 IGVAGSGSID YGAEPRLKLG FAGTPMSISA LKRMWPVLIV PEVREWVNER IDKGSIQSID
601 IAVNSPVKNL SRRGPPIPDE GLLVNIIGSG ATIHPVDGMP SVRDADMRVR VTGRTATVAV
661 AQANAESPSG RKIALSDILF EVPDMAPKPS PSRIKFKLDG PVQAVAEVLS SGRLSDVSNV
721 PMDPNSSKGA VSAQIMLGMP IQRQLTKADT VYSINADVNG FSADKLVMGQ KLEANTLKVI
781 ANNQGYQVKG DVKINGQPAT LDYRKPAEGE ADVRLQSTLD DASRAKLGLD LGSAVTGPVP
841 VKLAGKIGDG DQETKLGIDA DLTAVKLDNV LPGWTKPPGK AARASFNVLQ KGQSTRFEDI
901 QVEGSGTLIK GALEVDQDGD LINATFPVYS PSEGDKTTLK ADRGQDGVLK VVMRGDVFDG
961 RGVIKSALSG TQSDPKSKTK GIDFDLDLKL GAVAGFYGEA LRSVDVKLVR RNGAFRTFNL
1021 AGKLGRDTPI TAELRGKNRG REVIYLETND AGSFFRFSDT YSKIYGGQLA LAVEPPTVEP
1081 REKEGLINVR DFTVKGEAAL ERAAAGAPGG TSAGLAFSRL RAEFTRQNGQ LTVRDGVVKG
1141 PTIGATIEGS IDYPANQVRM SGTFVPMYGL NNMFGQIPIV GLFLGGGSNE GLIGVTYEVV
1201 GTPGQPVLRV NPISAMAPGV LRKIFEFNTG RQNNGVDFPT PPN
//