LOCUS ABE39674.1 830 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Penicillin-binding protein
1A protein.
ACCESSION CP000283-2434
PROTEIN_ID ABE39674.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2444"
/EC_number="2.4.1.129"
/transl_table=11
/db_xref="InterPro:IPR001264"
/db_xref="InterPro:IPR001460"
/db_xref="InterPro:IPR011816"
BEGIN
1 MRLLLRFFGF LFAAGTIVFL VGVAGAAGMI WHFSKDLPDY SQLQDYEPPV MTRVHASDGS
61 LLGEYSKERR LYLPIQAVPK PVINAFLAAE DKNFYEHGGI DYSGMARAAI LYAQNIGSNR
121 RPQGASTITQ QVAKNFLLTN EVSFTRKIKE ALLAMRIERA YSKDRILELY LNEIYLGLGA
181 YGIAAASLVY FDKSVNELTV SEAAYLAALP KAPAVLHPIR NHDRAVERRN YVIDRLLENG
241 WVKQADADKA RKEPLTVTSR STGAHTFAGE YFAEEVRRDI FERYGEKKLY EGGLSVRTTL
301 DPKLQVEARK TMTAGLVKFD EAQGWRGSAS KLDISGDWGV KLADVKSLSD ISPWRMAVVL
361 DTSDQSARIG FQPGRELGGA VSKQRETGLI TLDGVKWAKP AAGPQRGRTP GSVSQVLAAG
421 DIIYADPLLD KEGKPVEGQY RLRQIPEVSG AMVAMDPWTG RVVAMVGGFS FDQSQFNRAT
481 QAYRQPGSSF KPLVYSAAMD NGYTPSTVVV DAPIEIDQGQ GAAVWRPENY STGKYYGPQT
541 LRNALQKSLN TVTVRLAQDV GMPLIGEYAK RFGVYDELPN YLSYALGAGE TTVMRMVTAY
601 SMFANGGRRV KATLIDRIQD RYGRTIFKHD ARECRGCDAP EGWKNQAEPQ LIDRREQVLD
661 PMTAYQITSM MEGVVQAGTA TVLREVGKPI AGKTGTTNDE KDAWFIGFSP DLVVGIYFGY
721 DKPRNLGRGA TGGHLAAPVA KDFFKLALAD KPAVPFRVPA GIKLIRVDAK SGMRAGPGDG
781 GRTILEAFKP GTAPPDNYSV IGVADAEGRQ QQMAPPDDRG FMRPGTGGLY
//