LOCUS ABE39309.1 651 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 ABC transporter related protein.
ACCESSION CP000283-2069
PROTEIN_ID ABE39309.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2074"
/transl_table=11
/db_xref="InterPro:IPR001140"
/db_xref="InterPro:IPR001687"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011527"
BEGIN
1 MAHPHSHSQS GPAAAIPEDA VAQKATLGGT LVHLWPYIWP GDRVDLKMRV LWSVVLLLVA
61 KAATLIVPFT FKWAIDALTG ADTAPIEPSN WMLWLFASPL LLTLSYGLVR VLMALLTQWR
121 DGLFAQVAMH AVRKLAYRTF VHMHELSLRF HLERKTGGLT RVLERGRLGI EVIVRMVILQ
181 LVPTIVELAL VMGVLLWQFD WRYVAVIMVT VVVYMFYTYK ATEWRIAIRR RMNDSDSDAN
241 QKAIDSLLNY ETVKYFGAEE REARRYDKSM ERYEDASVST YTSLAVLNAG QAVIFTCGLT
301 ATMLMCAVGI RNGTNTVGDF VMINAMMIQF YQPLNFMGMV YREIKQAIID IEKMFAVLSR
361 NPEVQDKADA KPLVVTDGVV KFEDVRFAYD PSRPILKGLS FEVPAGKTVA IVGPSGAGKS
421 TISRLLFRLY DVSGGHIRID GQDIRDVTQT SLRAAIGMVP QDTVLFNDTI RYNIRYGRWN
481 ASDAEVEEAA QTAQIDAFIK ASPKGYETEV GERGLKLSGG EKQRVAIART VLKSPPILVL
541 DEATSALDSH TEHEIQGALE RVSQNRTSLV IAHRLSTIVG ADEIIVLDQG RISERGTHAQ
601 LLEHGGLYAS MWNRQREAEE ARERLAMIGD QDSPVRSAII DDDLATSAAA E
//