LOCUS ABE39188.1 750 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Penicillin-binding protein
1A protein.
ACCESSION CP000283-1948
PROTEIN_ID ABE39188.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1953"
/EC_number="2.4.1.129"
/transl_table=11
/db_xref="InterPro:IPR001264"
/db_xref="InterPro:IPR001460"
/db_xref="InterPro:IPR011816"
BEGIN
1 MPKILPDRWK QRIRNRLLDF DARIDSTLFS SAVGIRELWE RFSTFMDRFY VGRWKRWVFI
61 EPLSEAATIG AGGLLVLLAL AQPAFRETAD EDWLKKSDLA VTFLDRYGNP IGSRGIKHND
121 SIPLEDFPDS LIKATLATED RRFYDHFGID IAGTARALVT NAQAGGVRQG GSSISQQLAK
181 NLFLSNERTL ERKVNEAFLA IWLETRLSKN EILKLYLDRA YMGGGTFGAD GAAHFYFNKS
241 VRDVNLAEAA MLAGLFKAPT KFAPHINLPA ARARANVVLD NLVDAGFMTE GQVFGARRNP
301 ASVVDRRDEN SPNYYLDWAF DEVRKVVETF PKSYTERVFV VRTTIDTNVQ RAAEAAIENQ
361 LRQFGRDYHA TQAATVLSDL DGGVRAMVGG RDYGSSQFNR AVDAYRQPGS SFKPYVYTTA
421 LLNGFKPTSI VVDGPVCIGN WCPQNYGHSY SGSVTLTQAI TRSINVVPVK LSITLGGKAG
481 PKAGRAKIVE VARRFGIKAP LIDTPSLPIG STEVTVLEHA VAYATFPNKG KAPTPHAVLE
541 VRTGAGDLVW RFDRDGPKPR QAIPASVAAD MAGMMSHVVS EGTARRAALD GIPTAGKTGT
601 TNAYRDAWFV GYTGNFSCAV WYGNDDYSPT NRMTGGSLPA QTWRDIMIAA HQGVEVSELA
661 GVGMGTRLPA SPAQANARAA DDDAKPAPPP VLTRRGADIL ARLEKMLDDA AKAIDKTEPG
721 KPVSSTTVGF PDNFAAASPG GAPASGPRKN
//