LOCUS ABE38970.1 891 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 alanyl-tRNA synthetase protein.
ACCESSION CP000283-1730
PROTEIN_ID ABE38970.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1734"
/EC_number="6.1.1.7"
/transl_table=11
/db_xref="InterPro:IPR002318"
/db_xref="InterPro:IPR003156"
/db_xref="InterPro:IPR012947"
BEGIN
1 MSGVNEIRSA FLNYFAKNGH DIVPSSPLVP RNDPTLMFTN AGMVQFKNVF TGLEKRPYHR
61 ATTSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKDRAIELA WNLITKEYGL
121 PKDRLLVTVY SEDDEAFGLW KKIAGLPESK IIRIPTSDNF WQMGDTGPCG PCSEIFFDHG
181 DHIFGGPPGS LEEDGDRFIE IWNLVFMQFE QVAPGNRTPL PKPSIDTGMG LERIAAVLQG
241 KHDNYEIDLF QALIRAIAEL TGADPQGEQK GSLRVIADHL RAASFLIADG VLPSNEGRGY
301 VLRRIMRRAM RHGQLLGARE PLMWRLVWAL VREMGQAYPE LVRAEAMIEE TLRLEETRFR
361 KTLERGLTIL DEKSGSLKKG DMFDGDTAFT LYDTYGFPLD LTQDALRNRG ISVDIASFTD
421 AMDRQRAKAR ASWAGSGEAA TETVWFGLRD KLGATEFLGY DTETAEGVVT ALVKDGKEVE
481 ALKAGDAGAI VLNQTPFYAE SGGQVGDTGV LTGEGVRFRV TDTLKKAGDL FVHFGTVEEG
541 TVKPEAALAL EVDHSRRSSI RANHSATHLL HEALRQVLGD HIAQKGSMVA PDRLRFDFVH
601 QKPITQDELR RVEDIANDIV LENDEVTTRL MAVDDAREAG ARALFGEKYG DEVRVVSMGK
661 ASREHGSNAF GWSVELCGGT HVRRTGDIGL ISVTGESAVA SGVRRIEALT GRHARQSANA
721 AMATAKAAAA ELRTTLDDMP ARIASLMDER KKLERELSDA RKKLAMGGSG AAGAADGGAD
781 VRDVGGVKLL ARAVEGIEIK DLKSLVDQGK KQLGSGVIAL VAKSEDGKGS IVVGVTPDLV
841 ARFSAVDLVR KASEVLGGKG GGGKPDMAQA GGPDGSKAQA ALDAIAAAIG G
//