LOCUS ABE38926.1 1280 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 conserved hypothetical
protein protein.
ACCESSION CP000283-1686
PROTEIN_ID ABE38926.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1690"
/transl_table=11
BEGIN
1 MPALNPARGT MREGGTRPAR QNRVVDRKTR MARMAAAAVW SQALCWRLAR FCLALGLVLT
61 FALAAWPAAA QAVRGEASFD ATGGYGRLLL KLAEDVESDV TMAGLILVIR FKRPVDIPID
121 KLADSAPNYI GSARLDPDGS AVRLALVRKL NVNPMAAGER LYIDFLPDNW SGAPPGLPQD
181 VVKALAERAR LAERALRAQQ ARADVKKRPP IRVRASMQPT FVRYLFEIPN DVQVSSTLTD
241 KKLTVSFNTG LSFDLADAQL AGAPNVGAIS QRIDGNGSSV DFPLIGGADV RSFREEKNFV
301 VDVGFQPQDG EPLKRNSSAL TLPEIAKLER KPAAPARGAE NGKADTHGAG DADHATTPET
361 KPAAKPQAQA APQSAAAPPK AAAAAPAPAG PPPRQAEAAT PSKAAAPPVA APVAAVPASA
421 APATAGAEAS AAPAASPQPS AGPVVAENPQ APPPAPADAV VAMPAAASSA ARAAEARRST
481 DGLQLTFTFA TPTPAALFRR GEMIWLVLDN TAPFDLAAIR REGGGIVGDV ARVALPQGQA
541 VRIRLDRPQL AALSDEDGSG KSWSITLADS GRGASRPLTA VRNIADPARS TVTVALNGLG
601 QIHRLTDPEA GDALTVVTAL PPPRGFIKRQ TFVEFNLLES IHGVVIELKS DDVTVDAAAD
661 AVVLTRPGGL TLSSAEPAGQ VGSPTEKPFF DIAQWSKDQE GRFLEVLDAK VNAASAATGD
721 DRLPARLDLA RFYMARGLYQ EAKGVLDLAL LGVKTGQEDT ATMIGHAAAS ALMSRPEQTL
781 KDVANPAISS TYDAQLWKGV ALARQGKWPE AREKLKTVQF AVTALPLDIQ REVLAAAMRA
841 SLEVRDYSGA AKISSDFDLV GIPAQLKPQL AFMRGWLDES LGRDQEALRK YKEAMASPDR
901 QAVSEAKFRD IVLRSKRDEL TPAEALPELE RLSVTWRGDD LEVRTQQLLS KLYANAGRYR
961 DSLAAARIAT QLAPNSEYAR QAQDDSRALF SQIFIGGKGD DIPPIEALAT FYEFRELTPI
1021 GRRGDEIIRR LADRLVAVDL LDQASELLQY QVDKRLEGAA RAQVAARLAM VYLMNHKPDR
1081 AIAALHSSRI ADLAGEIRQQ RLLLEARAQS DIGRHDLALD IISNIGGREA IRLRSDIYWA
1141 SRRWRESSEQ IELYLGDRWR DFTPLSQAEK GDVIRAVVGY ALAEDALGLG RFREKFAPLM
1201 TDPADRAAFD IASRPAAGDS AAFAAIAKMA ASVDTLEGFL REMKLRFPDA TARAAPPGAD
1261 MNSTGSLPEV PKVRVIKMTR
//