LOCUS ABE38797.1 3094 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Animal haem peroxidase protein.
ACCESSION CP000283-1557
PROTEIN_ID ABE38797.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1560"
/transl_table=11
/db_xref="InterPro:IPR001343"
/db_xref="InterPro:IPR002007"
BEGIN
1 MAAFTLNQAD LAFILRQIKV AEAHAAGAPL TSIYVDALGN VVPAGTPGAL LAVADPKVPV
61 GLRTVDGQDN NIVPGREQWG AADQSMPRLL TASYTTGAGS IDLNGPAPGG VVTGGNYAAP
121 GTIVDTAPRT VSNLIVDMSL NNPAAIIAAL TFAGSEDVLA DQSEITAAFL ALKAARDADP
181 LGDHAALQLE LDTILEQKGV TVTNGSIDVP NVAPDEGLSA PFNAWMTFFG QFFDHGLDLI
241 SKGGAGTVYV PLAADDPLRT HGPDGIAGTG DEVPGQMAFM ALTRATPAAD GSQVNTTTPF
301 VDQNQTYTSH ASHQVFLREY KMVGGVPMAT GKLLGGAEGG LATWADVKAQ AQNMLGIVLS
361 DLDVLNVPLL RTDAYGEFIR DANGFAQVII GLGDDGIPNT ADDLVASGTN LAPLNLATLN
421 NGAGPVRTSH AFLDDIAHNA APVVVDGVLT PDTDSATGND VAINPLTGQR LEYDDELLDR
481 HYITGDGRGN ENIGLTAVHH IFHSEHNRQV DSQKLTILNS GDIAFINEWL ATDIGALDPG
541 FGTMTALQQL DYANSLNWDG ERLFQGARFA TEMQYQHLVF EEFARKIQPA IDPFVFNSVT
601 DINPAIFSEF ANTVYRFGHS MLTEAMPRLD ANGNPMDSEL GLVESFLNPV LFDNDGAISH
661 DAGAAAIVRG MTIERGNEID EFVVDALRNN LLGLPLDLAA INIARGRDTG MPSLNETRTQ
721 LYAASGSTFL KPYDHWVDLA TNLKNPASIV NFVAAYGTHA TIVGATTLEA KRMAAMELVF
781 GVDQNGDATV AADRTAFLTG TGAWAGVETG LNRIDLWIGG LAEKKMPFGG MLGSTFNAIF
841 ELQLENLQDG DRFYYLTRTQ GQNFLNMLEQ NSFAKLIMAN TDLAQPGPDG IRGTADDIVP
901 RHIGVDSFAN YDYVLEVDES NQADYNGAAP GKDPQGADPF LEALGLGKVI RNDPGTAGPD
961 ENYIRFSGGE HIVVGGTDGD DTIITDFGDD GIWGDAGDDR IESGAGVDLV NGGAGNDIIT
1021 DSGDTGDFLK GDEGDDVIAN SNGIDILMGG SGKDVVFVGV DDTEVFAGEG DDFVLGGDGV
1081 DFLLGNEGDD WMEAGGGFDT TAGDNSELFF NSAIKGHDVM FAGSEEHDFD AESGDDIMVQ
1141 GESVMRNEGM FGFDWAIFKG MSLDGYADMN IPIFTTDQAD ILRNRFDKVE ALSGWDNNDT
1201 LIGDSRVFGD IAAGDITATT EGVFFNDGLD QAGLDRIAGL DQIVQVGQTG LFESGNVLFG
1261 GGGSDVIEGN GGDDILDGDR WLNVRIRITG AGEANTADNQ IATVDSLKHV FSAADAADPS
1321 WVGKSLFELM IARTIVPNQL YIVREIIEDD GAGDTDIAVF NDIRANYVIS GNADGSIRVE
1381 HVTVSNVIDP ANGRNIVSDG VDTLRNFEVL RFADGDFTLT PPELRLNGFD SLTVADNFDA
1441 ANYTNSTGNR VWGSGWVETG DDNSATAAAG QIRITGGVLQ FDQGNGAQIQ RTINLAGVTS
1501 ARLSFDADPN NLDGGELVRV LYSADGIVFN QLDTIVGNGG NTTRSFDLTG PFTANSAIRF
1561 EVTSLNAANE TVNIDNLSVV VTVPAAIPTI DVGATFTEDG PATPIASLPN IADDSATMAS
1621 ARIVLTNASA GDQLVVGGLP AGIAGAIDTS VDGRITVTLT GAASRASYQD AIQAITFRTT
1681 SQSPSVDDRI IQVTVNDGLV DSNIATSTIQ VISVNDAPNA VNDRIVTNNG NGVAFQIPDW
1741 ALTANDTDSD SPFAITVVNG ANNLTATRPA GGPVTITDTG TINGGSFNYT VSDGFATDPA
1801 SVQVVRDTTG AINGNNGVDI LVGDGAANIL EGAGSNDLIF AGAGDDTINW TATSIGGVDI
1861 ANDGRDFVDG GAGTLDRFVV NGSGSEEAFV VYAASAALAA GFTGLKPGTE IVITRNGTVI
1921 AELDNIEEIT INTGAGSDTV TAVGDFDPTS LNFNTITING DGGNDTVDVS TLQSAHRILF
1981 RSNGGNDTIV GNLRPQDVVE LAPGTSLANY VLADNGNGTK TLSNGTHSIT FTGSVPPQFQ
2041 NGSAPGGNGE GVTGAFEYTA SDLAGLKALV NGQRPVGDDD DGATGVRDLS GHNNNVANPN
2101 WGSADQPFIR ITNPHYGEAD ANGNLAINPV FDGLDPRTIS NVLGSQEAGL PSAGNDANIF
2161 FMAMGQYIDH GLDFLGKGGN GTIQIGALGG GAPGSGNPAD LTRGSVASYD ANGVPQHINR
2221 TSPYVDQNQA YGSNDLVGQF LRAGDDNGGL GAHLFAGAPD PSNPEFALLP TLRELITEHW
2281 QNNTVFHSSS LQGGSVAFRD YFAGLVGQNG VINQALLPSM ISNFMGTNHA LLLDANPFIN
2341 VLDHYVSGDG RTNENFALTS IHTIWARNHN HHVEGLAAAG FQGTAEELFQ AAKMINEAEY
2401 QRVVFDEYLE TLLGGLRSQG THGFEEYDPN ANAGISHEFA GAVFRFGHSL IGQTMTVLDA
2461 NGNPTQVNLF DAFLNPSNDP SAFPNPLPPG YTPQPGYAQH GVNAIIGGTV SQPAEDVDFN
2521 IVDAVRNDLV RINADLFAFN VARGWDLGLG TLNQVRRDLA ASTNPYVAES VGFAGSNLTP
2581 YSSWEDFQQR NDLNNAVIAQ FKQAYPDLTL AAADIAAFRE VNPDIAIAMQ NDGTGIVSGI
2641 DRLDLWVGGL AEKHINGGLV GETFWVVLSE QFERLQDGDR FYYISRFDNF DFYENFIDGQ
2701 QFADIVTRNT GMTGIPEHMF QTDPIDQNEN EGEGEGEEDG TPVGNGDPPT DDDDDDDDDD
2761 DDDDGDGTAG GDDDDDDDTP PANGEGDGTT PPVGGVIRTG TPQPDVLVGG AGDDNIVAFA
2821 DDDVIAADAG ADAISAGDGN DFVTAGAGRD VIFAGAGNDQ VFAGDGADMI YGDAGADRIF
2881 GHQGNDLINA GAGDDIVFGG AGNDLIVAEL SDGNDVYYGD DSEGGSGIDT LDLSAATANV
2941 TVNLGSGPLF HGSASGSQTG NDTLWSIENV YTGSGNDTIT ASNAVNVISG GTGNDTFRFT
3001 STSAANGDTI LDFEPGDRID LTAIDASTSA NGDQSFELIN GATFTAAGQL AVSFESREDG
3061 DFTVIRGNID GNADADFKIE VAGHHNLTSS NVGL
//