LOCUS ABE38744.1 915 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 phenylacetyl-CoA:acceptor
oxidoreductase PadB subunit protein.
ACCESSION CP000283-1504
PROTEIN_ID ABE38744.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1507"
/transl_table=11
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006657"
BEGIN
1 MSATEDVKRV PTFCYNCVSG PDFMKVKVEK GVVTEVEPNF DAEQVHPGRG RPCVKAYGIV
61 QKTYNPNRVL TPMRRTNPKK GRHQDPGFTP ISWDEALDTI AERLKGIRAK GMIDDAGLPR
121 LAASFGHGGT PANYMGSFPA FLAAWGPVDY SFGSGQGVKC THSEHLYGEF WHRAFTVAAD
181 TPTTRYIIAF GANVEVTGGP TAVIRHADAR IRGYKRVQVE PSLTITGACS AEWVPIRPKT
241 DPAFMFALIH VLVHEHGLDR LDIPFLRDRT ASPYLIGPDG LYLRDPLSNK PLLWDEATGG
301 AVAFDTPGAI PVVAGRFRVA RAVTIDADSA RRDYADVEAV TAYQALTDHI KRYTPEWAAE
361 VCDVPAATIR RIAGEYLEAA SIGATTEIDG VTLPLRPVAV TLGKSVNNGW GAYECCWART
421 VLAMLVGALE NPGGTVGTTV RLNRPQDNRH LSVKPGDDGF MVQHFNPTSS NSWEAEPTTR
481 NLHRTLVPIV GRNGGWSQAL GPTQLAWMFQ ENLPPDWTMP KPTHPDLWFV YRSNPAISFW
541 DTRALAESVA RFPFMVAFAY TVDETNYMAD LLLPEATDLE STQLIRMGAT KYMEHFWDYH
601 GVALRQKAVE PQGDARDFTW IATELAKRSG LLTGYVEQLN RGIAGVSPLK GKDYDFSLDP
661 AQAPEPEQIW DSICRAATTT LSEGKHCHGL DWFREHGFYA IPMSRLQWYL TPTMEQQGLR
721 YELPYQERLL RVGRELGNRL HEQKMHWWDE QLAEYAALPD WHDVPGRWER ALVNSGARSE
781 DFPFWLLTTK SMQYHSGGNA GIALMDEVSE NLHGHTGVII NVDTAAKLGI GEGERVEVRS
841 HIGATYGKAA LVKGVRPDTL VIIGQFDHWA TPYIKDSERA SLNTIAPMTL ELSDATGSGA
901 DIVRVAVRRM QRPAA
//