LOCUS ABE38666.1 894 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 diguanylate cyclase/phosphodiestera
se with PAS/PAC sensor(s) protein.
ACCESSION CP000283-1426
PROTEIN_ID ABE38666.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1429"
/transl_table=11
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001633"
BEGIN
1 MVLRIGKAGS GAAGAAAMAG LFASISLAQA APQFEPGSQV GGFETELIWE LLIGGFVLAS
61 FTSAVALWAT AMLRKQRRAQ RRKNILVNSV LNKLQQGVVI TDANGTLVFC NDRYLELYGL
121 QRSDVPCGIA SHDMLALRRA RGTLDLSNEE FYRHAATPEG FISELPDGRF VQVKFSQLAN
181 GGMISTHDDC TQLRRVSKQL ATTSQFLESV IDNIPVCVAA KSIDDGRYIL ANRAFEKLSR
241 LPREQIIGKT AEDLFPPRSA AVIRDSDRVT LESGKNGFRS ELSIEFGQRD VVLATDRVVA
301 FNERNEPEFI IVLFEDVTER QMLARELDKT RRFLELVVDN IPVAVTVQNA SNGAYLLANR
361 GAEVILNRRR EDAIGLTSGE IFNAKEARLI EERDQLAIHK GGMMVEEYPI STKNGLRLFV
421 TRRMTVADEA GNTNYLIKTH ADVTDRRQTE ARMAHMAYHD GLTDLPNRTA FLKALAQMIE
481 ACDCTVDQFA VLSVDLDGLA EINDVFGHAV GDKLLIEVAR RIERASRGGV VARLSGDEFG
541 LIIDGPQPQA AHALAERVAE ALADGLEIDG KTVRTGVTTG IALFPRDGKD AASLLANAGA
601 ALFRAKARAR GSVSLFAPEM DMQIRDRRAL HQDLSNAIRN GELTLHYQPQ AASSKSIDET
661 DVVGFEALAR WRHPTRGFVP PGEFIPLAEE SGLIVEIGEW ILREACREAA SWPKPLQIAV
721 NLSPAQFLNS DLVGFIHQVL LETGLQPGRL ELEITEGVLI EDFERGLALL RRVKALGVRV
781 SMDDFGSGYS SLTYLQAFPF DKIKIDRAFI MNLGRNAQSA SIVRAVIGLG HGLGVSLVAE
841 GVETQEQLDF LVDEGCDAVQ GYLIGRPAPI DQFPCMVGLA PMLDEVPRLA LQVG
//