LOCUS ABE38569.1 872 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 NADH-quinone oxidoreductase,
chain G protein.
ACCESSION CP000283-1329
PROTEIN_ID ABE38569.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1331"
/transl_table=11
/db_xref="InterPro:IPR000283"
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006963"
/db_xref="InterPro:IPR010228"
BEGIN
1 MTRKIEIDGR VIEAGDGDDL LSACLTHGID VPYFCWHGAL GSVGACRQCA VKVYSGPDDT
61 EGRIVMSCMT PVADVERVSV SDPEAAQFRA QVIEWLMVNH PHDCPVCEEA GSCHLQDMTI
121 ATGHNIRRYR FDKRTHRNQD LGPLLTHEMN RCIACYRCTR FYRDYAGGRD LDAFGAHDNV
181 YFGRAEDGPL ESPFAGNLAE VCPTGVFNDK GWSQDYARKW DMRATPSVCP HCAVGCNILV
241 DQRGGRVKRV QNRYHGALNG YFICDRGRYG PLHVVSDARL LTPLINGEAA GEHDACAAAH
301 AAVAEGAIGI GSPRASLEAN YALQRLVGPE RFFAGVSDAE AAMVRRIVAI LRAGPAQIAS
361 LADVEQADAV LVLGEDLTNT SPRIALALRQ TARGAERELA AQKGVPQWLD PAVRVAGEGR
421 RSPIILATPV IDPLDDIAAL ALRRDPQAIA NFGASLAAAL GGVASADADA NRVAEILAAA
481 ERPLIIAGCS LGTAGIIEAA AALVSTLGPK ARIALLPPEA NSIGLALLGG DGVESAAALL
541 ERGAAKAAIV LESDLFERAP RASVERLFAA AKSVVVLDSM ASETTARASI ALPVAPFTEC
601 AGTFVNYEGR AQRFFAAVPS SEATPASWRR LDVFGAGDWH GLDALIGDLI VERPDLVGVA
661 DAAPDADFMM ADGQVTRAPR PYSGRTADDR AGQFADAAPP IDLDGPMTFG IKGARGTAVP
721 PALITSYKTS GHHSANNVTR FMEEVGGPLR GGDPGAMLLK AGEASLPDAP PSRAVEGDGL
781 LLVPLHDAFS GWELSRASAL LAARAPAPRL LLHPDDAALH GLTQGAAALI DGRLYPATVS
841 LDASLPRGTV AISAGVGVPR GPLHRVRVEA AR
//