LOCUS ABE38519.1 695 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Excinuclease ABC subunit
C protein.
ACCESSION CP000283-1279
PROTEIN_ID ABE38519.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1281"
/transl_table=11
/db_xref="InterPro:IPR000305"
/db_xref="InterPro:IPR000445"
/db_xref="InterPro:IPR001162"
/db_xref="InterPro:IPR001943"
/db_xref="InterPro:IPR003583"
/db_xref="InterPro:IPR004791"
BEGIN
1 MNQDPAETRD TAAPPPADTT SPSPVSPELE PRSAPGAQDI DAASASLTVD EDDEARLPEI
61 DDDSAEVADG PLAVGRAAIE QAVRLAPTSP GVYRMLNAAD DVLYVGKAKN VKKRLSSYAR
121 PTGHVVRIAR MIAATVTVEI ISTATETEAL LLEANLIKQL RPRFNVLLRD DKSFPYILIT
181 GDHWAPQILK HRGAQSRPGR YFGPFASVGA VNRTITALQR AFLVRSCTDS FFESRTRPCL
241 LYQIRRCAGP CTGEVDFPGY TELVREATDF LSGRSRAVKQ ELAVEMEKAS NELEFETAAL
301 YRDRLAALSA IQSQQGINPR TVEEADVFAI HQEGGYSCVE VFFFRTGQNW GNRAYFPRAE
361 KSFTPEEVLA SFLAQFYDDK PPPKLILLSH DIEECELLAN ALCIKAGRKV EVAAPKRGEK
421 KELVAHALTN AREALGRKLA DTATQTRLMQ GLATTLGLPR PPQRIEVYDN SHIQGTNAVG
481 AMIVAGPDGF IKNQYRKFNI RSEGLTPGDD YAMMREVLQR RFKRLAAAKA EGDAAKPKED
541 DTPLWPDLVI IDGGRGQLNA ARGVLTELGL GAEVTLLGVA KGPDRDAGRE TLFMPEREAI
601 KLEPRDPVLY FIQRLRDEAH RFVIGSHRKL RKKDIREAGL QEIPGIGPTR KRALLHHFGT
661 LKEIERASIG DLGKVPGISA ESARRIFDFF HPGPG
//