LOCUS ABE38349.1 688 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 lipopolysaccharide biosynthesis
protein.
ACCESSION CP000283-1109
PROTEIN_ID ABE38349.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1111"
/transl_table=11
/db_xref="InterPro:IPR003856"
BEGIN
1 MSPQPSSPDA PTDRTSDGLD FRNVLGILAR RKNWVIGVPL ALCAMVAAYL LIAQPAYTGM
61 AQVFVDPRDQ YTPKDDPLQN SVPGDGLLLV ESQLKIITSN EVLNRVIEQM DLQNDPEFNG
121 QRFGIGRFVK SLIGLGKTED RALTTLRNLR LKVATRRIDR SFVIDILASA DTAPRAAALA
181 NAVATSYLEE QAGANSAFQR RTSEAISAQL GKLRQEVKRG EEAVAAFKAA NNLVGARSRL
241 VSEQQLDEAN TQLTNARTRL ADAQARVRLI ETVEQGNAGL DSLPEAMQSA AIVQLRGRAV
301 DASREEAQLA QINGPNHPAL QAARAQVRDV QAAIQRELKT IARSVRNTEA SERTNVQNLQ
361 ANFDALKAQS QANDKLMVPL RELERKAESS RIVYESFLAK AKTAEERQGI DTTNIRLISR
421 ATAPENKSWP PTLIMLAAAI FAGLTIGIAL ALARDYFERP VRDPEPDAVA VSDAPSLAPA
481 DPAPVFRPAV KAQSHAGRLS ALSEELLAAP KGHTVVLVQV QRGAWLDDVA LQLARTVIAN
541 QMDVMLVDAD LARHQTTSRL GYDDAPGLRD VMAGDAAIGD VVRLHKPTAM RVVPVGLAAV
601 GSRDPRARQA LSLAFQQLRV FDRVIVDGGE MGSTASEFGM YYMADEVVFL AQAPGGKSDD
661 AAILVDLLQH RQIKARVVFV EPDVSVAA
//