LOCUS ABE38341.1 630 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 AMP-dependent synthetase
and ligase protein.
ACCESSION CP000283-1101
PROTEIN_ID ABE38341.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1103"
/transl_table=11
/db_xref="InterPro:IPR000873"
BEGIN
1 MQSIVSRIRV SCTDNSHDLV GLAFMNIQAR PATDDALQTR RAQPSVAKSW LKAIEITARV
61 EQEPRRLLAT VVDEWAAVAP NSPAIVSDRD SYSYAELARR INRYARWALE NGVGIGDVVC
121 LLMSNRPDYV AAWLGITKVG GVVALINTQL VGASLAHCID IAQPGHIIVG EEFVDAWESA
181 RAHLGAAPRI WLHGETSGDK ALDQALAALD SAALAPQEQR DVGIDDLALL IYTSGTTGLP
241 KAARVTHRRV MGWAGWFAGL TDAAPDDRMY NCLPIYHSVG GVVATGSMLM AGGSVVIAEK
301 FSASRFWDDI IRWDCTLFQY IGELCRYLLQ APPSDRDTRH RLRLCCGNGL RGEIWEPFQA
361 RFAIPRILEF YASTEGNFSL YNVEGKPGAI GRIPSFLAHR FPAAIVKFDV ETGGPLRDEN
421 GLCIRCARGE TGEAIGRIGE ARDSGGRFEG YTNDSETEKK VLRDVFAAGD AWFRTGDLMR
481 LDDKGFFHFV DRIGDTFRWK GENVAASEVA ETIAACPGVI DASVYGVSVP HTDGRAGMAA
541 LVVDDRFDLA ALHRHLAERL PAYARPVFIR IQAALQITGT FKQNKQDLIR DGFDPVVVSD
601 PLYLGDATAA GYVVLDEPLH RRIAAGTLRL
//