LOCUS ABE38190.1 838 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Glycogen/starch/alpha-
glucan phosphorylase protein.
ACCESSION CP000283-950
PROTEIN_ID ABE38190.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0952"
/EC_number="2.4.1.1"
/transl_table=11
/db_xref="InterPro:IPR000811"
/db_xref="InterPro:IPR011833"
BEGIN
1 MPVQSVFEKL QQQQPPIDEL ALSEIKSAIL AKLTLVIGKA ATQATKHDWY KASALALRDR
61 IVHRWLVSEK ESYDAGRKRV YYLSLEFLIG RLFTDALNNM GLLAQYAAAL GDLGVGLNDL
121 RKCEPDAALG NGGLGRLAAC FMESMATLEI PAFGYGIRYD YGLFRQIINH GWQQEFPDEW
181 LSFGNPWELQ RPEVVYQVKF GGSVEQVTDA KGLTRAVWTP VETVQAMAYD TPIVGWRGEH
241 VNALRLWSAR APDPMLIDVF NTGDYLGATA HEARAEAICK FLYPNDESAA GRELRLRQEY
301 FFVSASLQDL IQRHLDSDGQ IRSLAKRAAI QLNDTHPSLA VTELMRLLVD VHHLRWDDAW
361 QITIATLSYT NHTLLPEALE TWPLDLFERT LPRHLQIIYR INEAHLALAE VRCPGDIEFR
421 ASVSLIDERG GRRVRMGHLA FIGSHRINGV SAMHSDLMQE TVFHDLNHLY PGRITNKTNG
481 ITFRRWLTLA NPGLTNLVRA ACGDEVLDDP TQLQRLEAFA GDSAFQQQFR SVKHRNKIAL
541 ARLISERNGV RIDPGALFDV QIKRIHEYKR QLLNVLETVA LYHAIKDEPN RDWVPRVKIF
601 AGKAAASYRY AKLIIKLIND IAEVINNDES IGGKLKVVFL ADYNVSLAEV IIPAADLSEQ
661 ISTAGMEASG TGNMKLALNG ALTIGTLDGA NIEIRDHVGA ENIAIFGMEA LEVVARRAQG
721 LDANDVVSRS PQLARAIRAI DAGAFSPDDP ARFASVAHAL RHLDHYMVSA DFDSYYEAQR
781 GIDARWRAGS AWTRAGILNV ARMAWFSSDR TIREYAEDIW DVPTRHATQP SPARRAKG
//