LOCUS ABE38015.1 590 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 ABC transporter related protein.
ACCESSION CP000283-775
PROTEIN_ID ABE38015.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0777"
/transl_table=11
/db_xref="InterPro:IPR001687"
/db_xref="InterPro:IPR001851"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
BEGIN
1 MKRHAPRLIR AASAAAILIL PFTGLMPDYW ITLFNYIGIS SLVAIGLVLL TGVGGMTSFG
61 QAAFVGFGAY TTGVLTVYYG VSPWLTLPAA IAVTMVAALL VGAITVRLSG HYLPLGTIAW
121 GIAFFYLFGN MSWLGAHDGL PGIPALQIGG YALIQPRDYF VVVWIAVVLA VIATQNLLSG
181 RVGRAVRALR RSTRAAEAFG VNTAGAKLLV FVYAAMLAGL AGWLYAHFQR SVSPGPFGIT
241 AGTEYLLMAV LGGAGRVYGA ILGAAGITFL RDQLQDWLPK LLGHTGNFEI IAFGAVLVLL
301 LQTAPGGLWP ILFGPPPAPK LPPPPEGDRL PVRALPPPGT PLLQADQARK TFGGLVAVND
361 VSFEVDSGRI IGLIGPNGAG KSTTFNLITG VLPLTSGQIE FEGHPLEAQT PRRAALLGLG
421 RTFQHVEIVA DMSVIENVAL GANLRGQAGA LRAIFRLDRA EEALLLDSAM RALARVGLAD
481 LAHEPAGTLA LGQLRLVEVA RALCLEPVLL LLDEPAAGLR VGEKKALARL LREVRAEGIS
541 VLLVEHDMDF VMSLADRLVV LDFGTKIAEG IPAAIRQDPA VLEAYLGGVS
//