LOCUS ABE37979.1 562 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 circadian clock protein
KaiC protein.
ACCESSION CP000283-739
PROTEIN_ID ABE37979.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0741"
/transl_table=11
/db_xref="InterPro:IPR001553"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR010624"
BEGIN
1 MTEGIAKSLT GIEGFDELTL GGLPSGRPSL VCGSAGCGKT LFASTFLING ARLYGEPGVF
61 VTFEERPVDI VDNVQSLGFD LQELIDQSRV FIEHIALDPS EIAEVGDYDL EALFLRLEYA
121 VDQIGAKRIV LDTIESLFSA FSNPAVLRAE IRRLFDWLKQ KGLTAVITGE RGDGTLTRQG
181 LEEYVSDCVI LLDHRVDQQI STRRLRIVKY RGTAHGTNEY PFLIDEDGFS VLPVSSLGLT
241 HQVFEERIST GVRDLDRMLT GGGFYRGNSV LVSGVAGSGK SSLSCMMADA ACRRGEKALY
301 MSFEESEAQT ARNMKSVGTD LGPWLASGQL RYIAARPTFY SLEMHLAVIL REVTRFKPDV
361 VVLDPISAFL GTGQIGEVQA MLLRIVDYLK SNGITGVFTH LAHGQETQTD AGLSSLMDAW
421 ILLLNREAHG EFNRELYLLK ARGISHSNQV REFVMSDNGI HLLEPYLGEG GALTGSARRS
481 AEARAHRAEI ERQTEVARVQ GEIAQRRSRA LAQIEALQAE IDADESELRR LAEIEDRHVR
541 QTAIDSDTLA RSRGIDHAPR TK
//