LOCUS ABE37956.1 628 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Heparinase II/III-like protein.
ACCESSION CP000283-716
PROTEIN_ID ABE37956.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0718"
/transl_table=11
/db_xref="InterPro:IPR012480"
BEGIN
1 MPAELVQTKL RWTAKVADVL PNLKSAVRKA QKVDAFHEPG ALARVSSAQR KRISSLIVGR
61 FARNMAARVS GGSAALTRLW PGRTDRLIIA PHDLRTADAT RAAEIYAGRF VFAGKIVTCH
121 GRSIFDLEPP SDDWEAALFG FGWLRHLRAA DTAITRANAR SLVDDWLSNM GRNRTVGRRP
181 DVLARRVISL LSQAPLVLGD TDGKFYRRYL RGLTREIRAL RYALLDVPDG VPRLQVMIAL
241 CYAALCLANQ ARNIRGATKR LSEELQSQVL PDGGHVSRNP GALIELLIDL LPLRQTFAAR
301 NIAPPPALLN AIDRMMPMLR FFRHGDGSIA LFNGMSGTPS DLLATLLAYD DSHGTPMPSM
361 PHSGYQRIDA GSTLVIVDAG LPPPPNVSQD AHAGCLSFEL SSGQCRIVTN CGMPGTNRES
421 WRAFARSTVA HSTVACHDTS SCQFIERSAM KRLLQGAPIV SGPTLIDNRR EAVAGGVLLT
481 MSHDGYRGKL GVLHQRVIMV KHDGSRVDGE DTVSPAQGGR HRAAQADYAV RFHLHPSIKA
541 TRLVDAHGVM LVLPNREVWT FEALDDKVDL EDSVFLAGND GPRRTTQIVI RQNSIEAPNI
601 RWSFIRSNAS PQATNARRNA RREPELPL
//