LOCUS ABE37891.1 519 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 NADH/Ubiquinone/plastoquinone
(complex I) protein.
ACCESSION CP000283-651
PROTEIN_ID ABE37891.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0653"
/transl_table=11
/db_xref="InterPro:IPR001750"
/db_xref="InterPro:IPR003916"
BEGIN
1 MPIHHLPLLA PIALLAVAAV SFANTGLRPK RLPGLAEAAA LLALAAALAS AAGLIVSGTH
61 VSPVLGLYGA GFSLRLDAVS AVMLLLVSFI GWVVVRYAGT YLDGEARQGP FTGWLCMTLA
121 AVLLLVTAGN LVQLVLCWIA TSVFLHRLLL FYPDRLPARR AARKKLVTAR LGDVALIGSA
181 ALLAAAYGTA DIGSILQAAR LGEGGSLAVG AAGLLAFAAV LKSAQFPAHG WLTEVMETPT
241 PVSALLHAGV INAGGFLLIR FADVMLLAPA VLAALVMIGG FTAVFGGLVM LTQPAVKTSL
301 AWSTVAQMGF MILECGLALF PVALLHIVAH SLYKAHSFLA SGGAVERVAA IRRPGPVAIP
361 DAGAVGRAFL AALVIYILVG LGFGLTHKSP QVVALGAILI FGVAYMLAQG FADAAPKALT
421 LRTAVYAVAT SVGYFALQSS ATLLTASVLP ATPTPGPLEW ALIVIALVSF GLIAIVQAMF
481 PLWAYHPAAA GLRVHLSNGF YANAVFDRLV GGWATRNAS
//