LOCUS ABE37874.1 1247 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 hydrogenobyrinic acid
a,c-diamide cobaltochelatase protein.
ACCESSION CP000283-634
PROTEIN_ID ABE37874.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0636"
/EC_number="6.6.1.2"
/transl_table=11
/db_xref="InterPro:IPR003672"
/db_xref="InterPro:IPR011953"
BEGIN
1 MRGCAGVRRM HLKLDATASI DDGDVARDLQ QAPAEIVVLS AADTDLAAFA AARATLPDDF
61 PSLRLTNLLA LGHPASVDLY VERTLAKARI VILRMLGGEA YWPHGVESLR RDAFARGALF
121 ACIPGEMQWN ADLAARGNVD ADDAHSLWRY CTEGGVDNLQ LALRYAAWMI MRGDPPPPPR
181 PMPAAGFWPD EPQKSQRRRA LVIFYRALAA SGDTAAIDAL RLALDARGLD AACLYVTSLK
241 DARSIAFLRS ALAADPPDII VNATAFATAT ATDDSGVLAS ADCPVLQIAQ AGISRDSWEQ
301 SSRGLNPRDL AMHVVLPEVD GRIFAGAVAF KQRGTDETDY APTIYQPLDD RIAAAADLAQ
361 AWVRLRRLPR DQRRVGVVLA NYPNRDGRLG NGVGLDTPQS LQDLLTALRA EGYLTGDLPA
421 DTAALMQILQ RGPTNALTGR DLRDGGVAWP VADYNGAFAT LPDAVRSAVT TRWGQPDADP
481 HVADGCFRLG LHRFGNVLVG VQPARGYNID PKSSFHDPDL APPHHYLAFY LWLRREFDAH
541 AIVHLGKHGN LEWLPGKSAG LSRDCFPAAL LGPLPHLYPF IVNDPGEGIQ AKRRSAAVII
601 DHLTPPMTRA ELHDEMARLE ALVDEYALAA DLDPKRADVI AEDILSLARA TRLDADVEID
661 RSTPTLDALR AIDAHLCDLK EMQIRDGLHV FGRTPQPSQR DDLLVSIARL PRSELKPQDA
721 SLHRALAQDL GLGEFDPLTR DLAADYTGPR PTVLADLCDR PWRTSGDTVE RIELLASRLV
781 STLHRARPDP LPSWPHTWPV LDWIAASLRP AIDACGDAER NALLRGLDGH FVRPGPSGAP
841 TRGRPDVLPT GRNFFAVDVR AVPTPSAWRI GALAAERLVE AYWQDAGEWP RAIALSAWGT
901 ANMRTGGDDV AQALALIGAR PTWEDATGRV TGFAIVPLSE LQRPRVDVTF RVSGLFRDAF
961 PVQMDLIASA IAAIAALDEP DDANPIAAHV RTRTDHLIQT GVAPDAAQRQ AGLRVFGSKP
1021 GAYGAGLQAL IDEGGWETRG DLADAYLAWG GYAYGAGRDG DEARDAFAAR LTATQLVAQS
1081 QDNREHDILD SDDYYQFIGG LAATVETLSG AAPKIAHLDT SRPEAPLPRT LAHEIGRVVR
1141 GRAANPKWIA GVMRHGYKGA VEIAATVDYL FGFAASTDAV GSHHFDQLFA AYLDDEQVRD
1201 FLRDANPAAM RETAERFAEA IRRGLWTPRS NHAADLLAEL LTRKETA
//