LOCUS ABE37829.1 1629 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 DNA helicase, putative protein.
ACCESSION CP000283-589
PROTEIN_ID ABE37829.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0591"
/transl_table=11
BEGIN
1 MKGVEERRGG ADETPALRLS ELLDYVEQVI KLDERPTFRL SEYRLANGQT FTFHEHEFHA
61 LPGITHDLTD DDGAIWLSIE RLKRNDPPTP PDRSVPWIEL SPDPEKTPIT RGHVLITVPK
121 AECDAFVASG RARAEDCAES LAVGAKGQFD IRLRLEDWPE IATEIEDYIS QSWLPWSVAE
181 RPRRRSIALY QKLFEVAQIS EMGGAEQAIE LVWGIGLSRW MFEGTLIDLP LIERLVEIEI
241 DESAAGTIRV RPRQAPATVN LRPYDELKID GVPMAQDAAR RALSAVDEES GVSPFERDTF
301 ELVLRACQTQ LDPGGVYLPD SERIEPTVPP PPASENLVVT DRWVVAARKR SDNFLLQDIA
361 NLKHAIELSP ADLPGPSRTL VMGPAPSRSN RWGALPGSLG GASESTVADE PSAPLGDLFF
421 PKPFNDEQVE IVRRLEENDG VVVQGPPGTG KTHTISNIIC HYLALGRRVL VVSHGEPALS
481 VLRDQLPPEV RDLAISITTS EKEGFKQLEG AVRLLQSIIE SIRPGEQHRL IRNLENSIIG
541 MRGRIAEIDA EIGRLAEKQL SAVPGSDLRP AELAAAVVAS GDKYSWFVDR PAAFAADATF
601 DDGDFERIRE ARLALGARIE HLRVDLPSVA DLPSGRVLAN LHLDIQRTDS LNAEAAKDVS
661 LVLRLHSVEA LEKAELAAEA LDVLVDACRH LERFPFLRSI CTASQLNKDD PVMQALRAFL
721 PEAKSVVAEH GKYLQTPVTV QDDVSPEMED LLARCAAGDK VFGIFAFKEK AFRPAVEAIR
781 ILSRQPSSSE EWLHVRDYVA WRKRFTDLRL RWSRLVPELA ADGVGIEAPR HLSELVDALE
841 DVLIVAPGIH DGLQAGLRDV AIGDTNGLWA DEAKLRTIRT ALRNAIAAVR LASARLEVAR
901 LSELFGESGG KFGRMSKSFL DEVVGRAGLP EARVEETWTK LLQAIDDLAR HRSQFVTVRE
961 GADHLEAAGA PIWAAKLRDK AALDGQDLEM PSDWREAWDW GAAQGYLSSL DQRGALGRLT
1021 TERSKLAETV AKSFEQLVRE RTFYALASSM TGQVRAALMM FATALRKVGK GTGKGAMRHR
1081 RDARKAMAAC YDGVPCWIMP SWRVAEQLPG ELGTFDLVIM DEASQSDIKE VTALLRGRKI
1141 LVVGDDKQVS PTAAFIDNAK IERLERTFLT NQPFKTLLLP GASLYDLAKV MFPDKFVMLR
1201 EHFRCVEPII RFSTQFYTEA LVPLRIPTTH ERIDPPLVDI YVPDGKRTGD KINHREAEVV
1261 VSEILKIVES PMLSKIGEGD RWRSIGVISL IGSKQAALIN RMLLDAVGEE TYMRHRIACG
1321 DSATFQGNER DIVLLSMVAD PAHKQSQTAL HFEQRFNVAM SRARDRLYLV RSVREEELKP
1381 EDLKAKVLRH FRDPMKGSQR PAGDLASLCD SDFERAVLNR LVDRGYRVTP QVGAMGFKID
1441 LVVEGVGDRR LAIECDGDKY HGPEKWADDM SRQRVLERVG WRFWRCWASS FTVDPDGCMA
1501 DLFRILDANG IQPAPAEFPP ERYAEQRVAD ARNESKAKSD EVGVAGVRSE SGIKIGDSIV
1561 VRYLDDNKTS SFVLSRDRHD PVNGLIGADT AFGKQILGFS EEDEIEVEDA GRSRRLLIVR
1621 AAKEGIRLH
//