LOCUS ABA59372.1 1010 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Type III restriction enzyme,
res subunit protein.
ACCESSION CP000127-2818
PROTEIN_ID ABA59372.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2927"
/EC_number="3.1.21.5"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR006935"
BEGIN
1 MKLQFEDDLD YQKAAIDSVV SLFKGQEISR SEFTVTFQPE SSLNLSLGLE ENQLGIGNRL
61 LLVDEEIEEN LRKVQLQNGL RPTKKLASGD FTVEMETGTG KTYVYLRTIF ELNKNYGFTK
121 FAIVVPSIAI KEGTYKTLQI TQEHFEGLYP KAKGYEYFLY DSSKLGQVRN FATSSNIQIM
181 VTTVGAINKK DVNNLYKENE NTGGEKPIDL VRATNPIIIV DEPQSVDGGL TGKGKEALTA
241 MNPLCTLRYS ATHVDKHHMT FRLDAVDAYE RGLVKQIEVA SLQIDSGHNK PYIRLDSTDN
301 RKGSITAKVE VDVQRGKNVR REFLTVEDGD DLEQITGRSI YENMQMGTIT CGKDNESIEV
361 KGDGFDQRLR PGEAIGGVDP DQIKRLMIRR TIKEHFDKEL MFAANKKPIK VLSLFFIDSV
421 THYRQYDEDG NAVKGKYARM FEEEYRKLAK SADYQSLFRE IDLEAGADEV HNGYFSIDKK
481 GRSVDTAENN QANRDNAERA YNLIMKEKEK LLSFDTKLKF IFSHSALKEG WDNPNVFQIC
541 TLRDMGSERE RRQTLGRGLR LCVNQNGERL RGNDVNTLTV IATENYEKFA DNLQKEIEQD
601 TGIRFGIVEP HQFATIQTLN EQGEVAPLGV EQSEKIWQFL KDQQFVDVKG KVQDSLRAAL
661 KNGNFELPEE IKQELVKNHG EEQTDIITSD IQAVLRKLAG KLDIKNADDR KIIRTREAVL
721 ESDEFRLLWE RIKYKTTYRV EFDNLKLLND CADAIRSCPP ITKTRAQFRK ADIAIGKGGV
781 GVQETSASGY TTIHENDIEL PDIITDLQDK TQLTRKSIVQ ILRESRRLQD FLRNPQQFID
841 YCSEAINRTK RLALVDGIKY TKIGDDHGYA QALFKQEELK GYLKNTLEVQ KSVYTHVVYD
901 SGSVEKSFAE DLEKNERVKV YAKLPPWFKV PTPLGSYNPD WAVVVEDGGE EKLYFVVETK
961 GSAWWDDLRH LEGAKIKCGE RHFEEIAKDT ENPVRYIKAM DVAGMMGHVE
//