LOCUS ABA59318.1 676 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 TonB-dependent receptor protein.
ACCESSION CP000127-2764
PROTEIN_ID ABA59318.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2872"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000531"
BEGIN
1 MRAFFLSKAI YAHPVESEPL TAELDKINVT EYAKDLTGPT ASVSQGRVSY VQLEKRPLLR
61 IGELLEVVPG MIATQHSGPG KANQYFLRGF NLDHGTDFSA SIDGIPLNLP THAHGQGYLD
121 LNSLIPEMVE SIAFQKGPYY ADVGDFSSAG NARIQTFNRL SQGIAKLAVG EDDFYRGLLA
181 DSSQLGKGDL VYAGEFNFYN GPWVHSNDSK QYKGLIKYTV GDSAQGLTLL GSAYHGRWKA
241 TDQIPQRAVE QGLISRLGTI DPTDGGESSR YSLGVNWRHH RANSSTHITA YGFYYDLDLY
301 SNFTFFLEDP LNGDQIHQKD RRWVVGTEAE HTWFLAWGER EVANTIGLQF RHDAIGEVGL
361 FHTRARKSLS TVRSDQVYQS RVGWYGESEI KWNDKFRSVV GLRGDFYNFD VNSRLPENTG
421 DRTDFIASPK LSFILGPWAK TEYFINAGYG FHSNDARGVT ATVDPETGMP LKQVNPLVRS
481 QGAEGGLKNQ GIPGLTTTLA VWYLALDSEL VFVGDAGTTE PSGSSNRYGV EWTNSYQLIS
541 WLTLEADFAF SKAKFAGGGE VPNSLGRVIS AGVTMDWPAN TRFFGALRLR HYGDSPLTEG
601 GNVKARSTTV LNLKAGYNAK QWEIALDVLN LLNSEDPDIA YFYDSRLPGE PSSGVPDILF
661 HPVIPRSIRG SVVVRF
//