LOCUS ABA59217.1 618 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 extracellular solute-binding
protein, family 5 protein.
ACCESSION CP000127-2663
PROTEIN_ID ABA59217.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2770"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000914"
BEGIN
1 MARRFTVKDF FLILFLSLLA LLILLTMYMV DRQWLKLAEM EQTLTEQARD LRGLRDLLRG
61 TGGGLTLAPM GNQDTAIIPP AFQRAYAATQ QPDYHPGDWF VQAFGAGLTT LTPLVSTDAY
121 AAEVQGYILE SLLTRHPETL DWQGLLARDW EVSEDGLVFR FHLREGLTFS DGEPLTAEDV
181 AFSFAFIMNP AIAAPRERAY YEKIERVTAL GPYQVEFKFK EPYFNSLALA GGLAILAEHF
241 YEPYLEKPEK FNQSKGLLLG SGPYRLPDPK GWTPDQGLVE LERNPRYWGP VQPSFDKLLW
301 KVIANDSARL TTFRNGDIDI YSARPLEYQK LREDQALAAR TQHFEYRSPA AGYSYIAWNQ
361 ERNGKPTRFA DRRVRQAMTF LTDRASMIEQ IMLGHGEAAV SPFNPDSPQH DSTLTPRPFD
421 LAKAKTLLAQ AGYADRDGDG VLEDANHQPF RFELVFFQDA DDTRRQVLFL KDLYARAGIL
481 LEPKPTEWSV MLDQISKKNF DAITLGWTSG VEIDIYQMFH SSQTVAGGDN FIAYQNPELD
541 ELIEKARATV DETERMPLWR ACERILYEDQ PYTFLMRRKS LVFVDQRMHN LGITRLGLNL
601 GMTPVEAYVP ESKQKYTY
//