LOCUS ABA59199.1 1166 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 CRISPR-associated helicase,
Cas3 family protein.
ACCESSION CP000127-2645
PROTEIN_ID ABA59199.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2750"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
BEGIN
1 MIILFVSECE KAAWKRSRRI LSRYAVQIGR RTWLARISAE GLQNIRRELT QAASRHTSVA
61 CHRVKGRYQT ELAWVVGSRR HFSRNGEFAF SHSATPLPSV NEEAAPAVRL LNHLCILAGL
121 FHDLGKHGAC FQRKLRDENS NQSDPVRHER ISLLLLLRLI ILTALPAAED NPPPVEPTPK
181 RRRRRVAGAN HNLSKPALGL ASLKDEQWLA ALTDSKKIYE ALHRIWKETS HDHWRELIPI
241 EGSTLRPQWS SAEGDRGLAP LLSVLCFLII SHHKLPDGHE DSFAPLEETY LNRSQELQDG
301 LRLATDYRPA WSQSPRWVNE ITKHARRARY LLQEHALPIR DRVLWYSAAR YMARCALVLA
361 DHSISSQAKR ELPVPSQSAQ AQVCFANSQQ GQLRQTLAAH LERVGKLSGK AFNQLHQLQH
421 NRKASTIETS PPALTVPIKE EAFSWQQKAE RKVLQIQRQE DNAKEGFFAL VMAETGSGKT
481 RGNARILAAA NRHQNYRLTV ALGLRTLTLQ TGDEYRDDLG FGKMPDAVGD QCAIMVGGAL
541 TTALHEMANA GEEAGAEKGN HLFSQEEQAG VESSALDDSL YEGITGEFDF DYDPDAPWPE
601 DIIAPNNPKL NHLLQVPVLV CTIDHLMPFL QSQRASAAVL GFRMAGSDLI IDEIDSFSAE
661 DLPALLKLAY VVGFNGRKLL LSSATLPPAT ARAFYRAYQT GFNRWRQLQG MESGPIRCGW
721 FSHHAAHIKL ASVADHAAFT KQHDRFIQAL LNTLQQQPAR RRLDTVLIPI AEGPAAVYQN
781 IMESCRELHQ QWASHDPESG VRYSIGCVRW SNVAHTCGFA KHWLNMPANL DDIQVKLICY
841 HAKHLPLIRH HIEQTLNTLL KRKEGRQAHD HPTLRAHLEN CRQQGKTHLL VIVSTSPISE
901 VGRDHDYDWG IVEPNSYWSL IQMAGRIWRQ RRHWEARQPN MRIMSQTMRG LNKQPMRFTK
961 PGPESKHFKL SDRAETLAQI FDLESLQESI DARFTLQEPL IQAEKIKNQY IYPDMRQLEH
1021 GQLQRLLEST EQSKQAMSFI EGARPQMVLT QRHSQCCPFR KDQNPNLLWF DREDDGVWKY
1081 LDKKEKKAKN VKDKVHEKRN YPCLAQSYFS PDELSRDSLH EKWREQLARR GVTDSHTINA
1141 LPLSIGDNFE QGKQLYYSDI IGWIFS
//