LOCUS ABA59125.1 784 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 DNA internalization-related
competence protein ComEC/Rec2 protein.
ACCESSION CP000127-2571
PROTEIN_ID ABA59125.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2672"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001279"
/db_xref="InterPro:IPR004477"
/db_xref="InterPro:IPR004797"
BEGIN
1 MTRVPNMLLN ALAFLTGIVI LQQLPLLPDP TWSLLLLGLL PWTLFQQRLR PLLLLVIGFL
61 WALFRADLLL SQELPLALEG QDILLEGTVA SIPEVLDHRL RFAFAPQRII FKSQTWHGPK
121 RVRLSWYRHP LFKLKAGDRW QLLVRLKRPR GFMNPGGFDY EGWLFRQGFR ATGYVRSATT
181 NRLIESHWYH HPLDRARQYL LEHMVPLLAD SPQRGLVQAL TLGERGAITP QQWQVLERTG
241 TNHLVAISGL HIGLLAGIAY FLGRRLWSLR AANILTLPAS QAAAVSAIIS ALFYAALAGF
301 SIPTQRALIM VSVVMLAVLA KRPIHTSRAL AFALILVLLW DPLSVLSPGF WLSFGAVAVL
361 TFGLTGQRPL PGTKTPGFSS LSSYLEHFWR RWGKAQWVVA IGLAPILLYQ FQRLSLIAPV
421 TNLVAVPWMG FLVVPPLLLG TILLIPFPLL GTALISLGDY LLALLWNILA WCSTLPVAQW
481 EHAGPPLWAL LPAILGSLLL LAPRGLPGRW LGLLALLPLL LTSSPRPSYG TLWFTLLDVG
541 QGLAAVVRTH HHTLVFDAGP RYSERFNTGE AVVAPFLRSQ NINTIDTLVV SHGDNDHIGG
601 VAGLLHHFPA KRILTSAPEQ LRWLHPKSCA RGQQWRWDGV YFHILHPQST VGRGNNHSCV
661 LLITSGAQRI LIAADIERSA EQTLLTATTD GLAATILVVP HHGSLTSSSP PFIAAVNPEH
721 ALFSAGYRNR WGFPKSAIVQ RYLRQGTKLW STAQHGAITF HLDQNPLSKP ETFRQSNRHY
781 WTGN
//