LOCUS ABA59069.1 450 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Type I secretion outer
membrane protein, TolC protein.
ACCESSION CP000127-2515
PROTEIN_ID ABA59069.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2616"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR003423"
/db_xref="InterPro:IPR010130"
BEGIN
1 MAFVKNGFFL IIFGFVASWP VQASDLLEVY RLARGNDPQL WAQVAAVQAA LEAKPQARAL
61 FFPTVDISSN FNWTTQNLTL LQQRVDPDTG FTIPGFKGSF INYGYSLNLA QPIYQRENFV
121 LLKQADATIA QARANLVAEE QGLLVRASER YFGVLTAQTG LSFAQAEKEA IAKQLEQTKQ
181 RFEVGMNTIV DVNEAQAAYD LAVAQVIAAE NALSNSYEQL REVTGQYVRD LADLKDNTPL
241 LKPDPMNIDR WAETALQQNP QIDASAAAVD NARQEIQRQK SGHYPTLEVV GSKSTNVTGG
301 GRFGGFQNDM DVIGLQFNLP LLQGGAVVSR TREAQHQLKQ ALEQLEQARR QVFRQTREAY
361 LGVVSEASQV KALQQAIVSN QSSLEATEAG FDVGTRTTVD VLNVRRDLFR ALRDHAQSRY
421 EHLLDTLRLK QGAGIITLRD LEEINQLLQE
//