LOCUS ABA59013.1 427 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 NADH dehydrogenase subunit
F protein.
ACCESSION CP000127-2459
PROTEIN_ID ABA59013.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2560"
/EC_number="1.6.5.3"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001949"
/db_xref="InterPro:IPR011537"
/db_xref="InterPro:IPR011538"
BEGIN
1 MIALNQVCFR TLDLDPPWGL ESYLKVKGYE VWKRILREKT PPSKIIDEIK ASGLRGRGGA
61 GFPTGLKWSF MPKDLAGIKY IVCNSDEGEP GTFKDRDILR YNPHQLIEGM AIAGYAIGAA
121 VGYNYTRGEF SEPIERFEAA LEEAYQAGLL GKNILASGVD FDLYSHPGAG AYICGEETAL
181 LESLEGKKGM PRYKPPFPAG FGLYGRPTTI NNTETLASVP VILEKGGQWF LKLGTPTSGG
241 TKIFSVSGHV NRPGNYEVPM GISFKDLLEL AGGMRNGNAL KAVIPGGTSV PVMPAEAIMA
301 ANMDYDSLAK AGSLLGAGSV IIMDETTCMV RALERISAFY REESCGQCTP CREGTGWLYR
361 VVHRIEQGQG TQEDLDKVVN VAENIDGHTI CALGDAAAAP VISFIKHFRD EFQYHIDHKR
421 CLVGSGS
//