LOCUS ABA58966.1 424 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 membrane protein protein.
ACCESSION CP000127-2412
PROTEIN_ID ABA58966.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2513"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR003416"
BEGIN
1 MALLEQLGLA LALGLLVGLE RGWQERHAEE GARIAGLRTF GLISLLGGLW ALLSEQFGAV
61 LLGFAFLTFV LLVLVSHFDS VKRSGARGLT TVVATLVTFT LGALTVAGYE VVASAAAVVV
121 TVLLGLKPVL HAWLARLRQE ELYAVYKLLL ISVVLLPVLP NQGFGPWQIL NPYEIWWMVV
181 LIAGVSFIGY FAVRIAGTGR GILLTALSAG LVSSTALTLH FSRIARANPR GQRLLSAGIA
241 FAAATMFPRL LLVVGIIHPS MALYLLFPAG LMGIIVYGGG YWLWRGAKRQ STPHLVLDNP
301 CDLGMAVKFG GLLALVILAA HALKEWFGEI GLYVAAGISG ISDVDAISLT LARMAQEDSQ
361 VLAVAAIGIF LAAMVNTLVK GGLAWGIGGS RFGLPLLGIF LLSIVVGGGS LLMWSGNFPS
421 LELV
//