LOCUS ABA58856.1 761 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 ABC transporter, inner
membrane subunit protein.
ACCESSION CP000127-2302
PROTEIN_ID ABA58856.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2398"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000515"
BEGIN
1 MVARDSETEE QVVPPPHSPV AIRRRRWRKI KDHLARYCIA AGGVSVIIAI VLIFFYLLYV
61 VIPLFRPAQL EPVAQYLAPG GNVGSTLHLA LNEYNDMGLR LTEQGQAVFF STAEGKVVLE
121 TPLPLPKEVA VTSFAAGDSA GKVIVYGLSD GRALLARHAY RVSYPDNVRT ITPRLEYPLD
181 KALLAVDSQG QPLRLISAQS DEDQTTIAAV TTDGRLILVN FTVQQSFLDD EITVEQATVS
241 LDLPPPQATH LVLDEQQEEL YVADSEGYIS YYQLRDKETP HLVQRVKAVS EDVRITALSF
301 LTGGISLLVG DSSGRIAQWF PVRSDGNHYT LEQIRIFKSQ RAPITAIVSE HARKGFLAVD
361 ISGRAGIYHT TAHQTLQVAG ISEAPLVTVA VAPRADGMLA GDSQGKIHFL KIENPHPEVS
421 WQALWGKVWY ESRDKPEFLW QSSSASDDFE PKFSLTPLTF GTFKAAFYAM LFAVPLAILG
481 ALYTAYFMSA KMRGLVKPTI EIMEALPTVI LGFLAGLWLA PLVEDHLPGV FAFLLLLPAG
541 IFMAAYLWRR LPSWVRQWVP EGWEAALLLP VVVGLGILAA VLSQPLEVAL FNGNMPQWLN
601 SQLGIAYDQR NSLVVGFAMG FAVIPTIFSI SEDAIFSVPK QLTFGSLALG ATPWQTLVRV
661 VLLTASPGIF SAVMIGLGRA VGETMIVLMA TGNTPIMDFN LFQGFRALSA NIAVEMPESE
721 VDSTHYRILF LAALVLFMVT FFFNTLAEIV RQRLRKKYSS L
//