LOCUS ABA58808.1 618 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 SecD export membrane protein
protein.
ACCESSION CP000127-2254
PROTEIN_ID ABA58808.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2350"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR003335"
/db_xref="InterPro:IPR005791"
BEGIN
1 MNRYPLWKNL LVVAVVLVGI LYAVPNLFGD TPALQISATR GASLKPETLA RVERLLQEQG
61 LDYQSVRLED QRLLVRLRRL ETQLKAQDAL RAELGSDYSI ALHLSPATPD WLRAIGGLPM
121 NLGLDLRGGV HFLMEVDMEA AVQQAEERYV EDLRSLLREN KIRYLSIGRL GAGGVEIKFR
181 NEQQREQAET LIHDEYFDLL LEPAEGERAP RLEIKLSEKE QREIQRLALQ QNITTLRNRI
241 NELGVAEPTI QQQGENRIVV QLPGVQDTAR AKEILGATAT LEFRLVDTSH DVQRAVEGRV
301 PVGSRLYHER GGAPILLKKR VILTGDHVTD ASSGIEQQGG SPAVFVSLDG QGARHFSQVT
361 GENIGKPMAV VFIETKSEIR MEEGEPVKVR RRVPEVINVA TIRDQLSKRF QITGLDSTEE
421 ARNLALLLRA GALAAPIDIV EERTIGPSLG QDNIDKGFQS VLIGFALVLV FMALYYRVFG
481 LVANLALAAN LVLVVSLLSM LQATLTLPGI AGIVLTVGMA VDANVLIFER IREELRNGSS
541 PQASIEAGYA NALSTIVDAN ITTLITAVVL FGFGTGPIKG FAVTLSLGIL TSMFTAIVGT
601 RAVINLIYGR RRKVKLSI
//