LOCUS ABA58805.1 460 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 UDP-N-acetylmuramate,
L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
protein.
ACCESSION CP000127-2251
PROTEIN_ID ABA58805.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2347"
/EC_number="6.3.2.8"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000713"
/db_xref="InterPro:IPR004101"
/db_xref="InterPro:IPR005757"
BEGIN
1 MHLHILGICG TFMAGLALLA RERGFHVSGS DASVYPPMSE QLQAAGIGIH EGYSAAALDP
61 PPDLVVIGNA LSRGNPAVEY VLAQGLPYTS GPQWLAEQIL QGRWVLAVAG THGKTTASSL
121 LAWILEYAGH GPGYLIGGVP QNFGASARLG RSPYFVVEAD EYDTAFFDKR SKFIHYRPRT
181 LILNNLEYDH ADIFPHLEAI QQQFHYLVRT VPNNGLILVP SGDKALATVL SMGCWTPVVN
241 MGIAGGVGSA LAARAVADDG SNFEVWYENS CQGQVHWPLL GHHNVANGLA AIGAARHAGV
301 PIGQGCQALE RFQGVRRRLE VCGKVNGVTV YDDFAHHPTA ISKTLAGLRA RVGKARIIAV
361 LEPRSNTMKL GVHKDSLAPA LALADRVLIY QPSDIKWSLI PIVHALGPNK ASAFFDIQAI
421 VDNLRTYVQG GDHIVLMSNG NFSHIQQQLL KALREEGEGR
//