LOCUS ABA58732.1 1470 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 fimbrial assembly protein protein.
ACCESSION CP000127-2178
PROTEIN_ID ABA58732.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2274"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
BEGIN
1 MMEKFRLNLP AYYAAAAALA LGYVGNTQGA NLNLNNKPLF LTDNAPPLTM LVMGKDHKLY
61 YEAYNDASDL DGDGTIEIGY KPARVDYYGY FDSHKCYVYS GNRFEPSTAA SDKTCSGAWS
121 GDFLNYLTTS RMDALRKVFY GGQRDIDTAS ETVLAGAFIP QDAHSWGKEY TSIAVDGYDL
181 NHYAPLTLPN AGKRHLFAVT SLADGNIPVL RVLQDKSERI WEWVSKEKPV ADDSLGTPDD
241 YSIRILACSS SLPEINCQQY GASSYKPTGL LQKYGENDSM YFGLLTGSYA KNTSGGVLRK
301 KVGSITDEID PGTGVFTTTN GIIKTIDNLR IIQFLYGKKP AYSPGWPEAW ITTRPMTEGE
361 QPNWGNPIAE MMYEGLRYFA GKASPTPAYS IGAGTSPDAD LGLPVATWDD PYASGNFPSC
421 SKPFQIVISD INPSYDTDQL PGSYFSSFTG DVSGLNSQAL ADTISSHEPE VAGSHFIGQS
481 GTNADGTPSA KDVTSLGDIR GLSPEEPTKL GGYYSASVAY FGHINDLHSA DGEQKMSTFA
541 VALASPLPKI EIPVNGQIIT LVPFAKSAGT TNGCAVDAIS SAAGDFQPTN QIVDFYAETV
601 TPTYGKFRIN YEDVEQGADH DMDAIVEYEY QVNNDGTVSI TLNSTFASGC IIHHMGYVIS
661 GTTADGTYLE VRDNDTSVGQ DPDYFLDTPP GASPGNGWQD DAALPLTTTR TFTPGTGSAA
721 TLLRDPLWYA AKWGSFNDRN KDNIPQGTEW DINNDDIPDN YFSVTNALQL ETQLTKAFEE
781 IIEETSSNSL VALNSGSIST NSHLYQARFS SGAWTGQVLD FPINSDGSLG AKNWEAADLL
841 DGVSSNSRKI VTYKPSTGKG IPFRWPADPD SPGSTELDVS QSTALNADPA TGTADGRGSE
901 RLDYIRGDEI SGFRERTRKL GDIVHSSPVY VGPSPQYRYP DDWTDIKHNE DSQNEDSSPY
961 SSFKSNTSRD AMVYVGANDG MLHAFDAVTG QERFAYVPNA VIKNLNRLTD PNYNHHYYVD
1021 GTPTVVDAFF GSDWHTLLAG GLGGGGQGIF ALNITTPGTS ESSIASKVLW EFTDTDDPDL
1081 GYTFSEPNIV RMHNGKWAVV FGNGYNNTEN DGSASTTGNA VLFIVDAETG ALIKKIDTGI
1141 GSDDPASGNR PNGLATVAPV DIDGDFIVDY IYGGDLLGNL WKFDVKESPN KWKVAHGQPL
1201 FTAKAADNSY QPITTRPQVG HHPTDPGSVM VYFGTGKYLE TNDDSSTGQT TQTFYGIWDK
1261 NDDKKFTSFT RSSLLQQEII KEVVQSFTDE DGSGNTGFEL RVTTKHPIDW STHEGWYMDL
1321 VNTENGNTNN YGEKQVSDSV LRNNRIIFTT LLPSDELCDF GGTGWLMELD AASGGHLSFA
1381 PFDLNNNGTF TRADYINLGD TDGDGNDDYV PPGGKKSKVG IISTPGIISG PGTNPGWEAK
1441 YTSGSTGNIE VTSENAGPGY FGRMSWIQLR
//