LOCUS ABA58689.1 1201 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 diguanylate cyclase/phosphodiesteras
e protein.
ACCESSION CP000127-2135
PROTEIN_ID ABA58689.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2229"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR012434"
BEGIN
1 MYTPQERKLD RRAFPRQPVQ MDAYINSARL GRREVEIRDF CLGGLFLVPR DSQAAYIQFR
61 GHTGETITVH LSCPTPAGHK DFSLNVRMAR VSEGGIGVAF SKPGPEVLQV LHYLTAQSRR
121 VPPKPTPALK RTVHPDERKG KQGDNALIKA CQQQIIDFSP IILRDFFERL DEALFLCARD
181 AENNLEQTFY LDAIEEIKGH RPQVEEHWQK KILARLSALG TTGNAPLPPR EDKTESSKLS
241 MVDKDEFEDW LAIAEAVSKM EARYADPLFE LEKRFSRLAG ESLDKENNPV GPRAICRALQ
301 EAIRDLEISH YIKQRIYKVF KETAEDKLSL LYNNLNELLR GEGILPSLER KFAAPQRQST
361 LKKALPFSEE SSVQANGAAS SSMPDKQEEA PLSNPVSPAS ISPSSVLKPE THAFDRPQQA
421 DSTIATAEAY RVTRELLGLY KLGGRRPRGG EEPSGKAAAS SLKANKAFAN SSMTSVSEDR
481 IAKRMAHLLP EIMEQEGTVH NDRSSAEACE LMEITGNLLV SILEDSVLSE NTKSWIEQLE
541 APLLRLAVLD KAFLHLEDHP ARQLLNLLAQ LEIPPSEERD DIDAQLEDNI DYLVEYIARD
601 FDQDVAIFNR VLDELKHLLE QRTQSISSNI AQVVESYKAQ QELKKKRRRI AEKQLEAGLG
661 GAGDSRWGDP MPSVKNREED PEEWVNRAKQ LPLHCWVQFA DGQNHLRRLQ LVWVAEDCTT
721 FVFVDSKGRK AATLSLNEVA MQLRRGTATV LEDANVPLLD RAQYAVLQKF HSHIAYEATH
781 DPLTGLVNRK EFEQQANRAL AKADHEAQSY VLLYLDLDQF KIINSTCGYE AGDALLKEIA
841 SLLTEFLPDG GILARLGDNQ FGVLLNQCSH DEGCEIAEQQ RIAIDNHRLV WNNKRLSVGA
901 SIGLVSVSEQ KCDAAVLLQR AEAACMEAKE AGRNRIQACE FDDEEFRRRH GMIEWVARID
961 EVLEDGRLQL WCQRITPIAD HLEMEPHYEI LLRLRDQDGR WIAAGEFIQT AEFYHRMAAI
1021 DQWVIQSAFR WMADHKERLE QLGGIAINLS GQSLNDRRLV TFIKREFART GVPPQRVCFE
1081 ITETAGVANL SHSAQLIEAV KDLGCHFSLD DFGSGLSSYS YLKNLPVDYL KIDGAFVKDI
1141 ATSPSDYAVV KSINEIGHFM GKKVIAEFVE SKAILAKLQE IGVDFAQGYG IEPPQILSAI
1201 E
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