LOCUS ABA58576.1 695 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Polyribonucleotide nucleotidyltransf
erase protein.
ACCESSION CP000127-2022
PROTEIN_ID ABA58576.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2116"
/EC_number="2.7.7.8"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001247"
/db_xref="InterPro:IPR003029"
/db_xref="InterPro:IPR004044"
/db_xref="InterPro:IPR004087"
/db_xref="InterPro:IPR004088"
BEGIN
1 MTPIKKVIEY GDRSLVLETG CIARQASGAV VVRYGETVVL VTVVGMKEAA EGRDFFPLTV
61 NYQERTYAAG KIPGGFFKRE GRPTEKETLT SRLIDRPLRP LFPKNFINEV QVIATVISSD
121 SENDPDIPSL IGASAALALS GIPFTTPIAA ARVGYIDGQY VLNPTLGQME KSALDLVVAG
181 TEKAVLMVES EAQELPEEIM LGSVMFAHQE MQVVIQAIRE LAEEAGKPAW DWKPPIEEED
241 LKSAVQEVGE ARAQEAYQIR SKQERQASLA ELRNSIVESL VPEENSRWSR EQVLEAIGAL
301 EKRLVREQIL SGGERIDGRD ATAIRPINIS TGLLPRTHGS ALFTRGETQS LVATTLGTER
361 DAQVIDAIEG ERRERFMLHY NFPPYCVGET GFVGSPKRRE IGHGRLAKRS LNGVVPDEES
421 FPYVIRVVSE ITESNGSSSM ATVCGTSLSL MDAGVPIKAP VAGIAMGLIK EKDRFAVLSD
481 ILGDEDHLGD MDFKVAGTEK GITALQMDIK IDGITEEIMR TALSQAREGR FYILQKMNEI
541 ISTPRQEMSE YAPRMIVFKI NPEKIRDVIG KGGATIRALT EETGTTIDIV DDGTVKIFSA
601 DKADGQEAKR RVEEIVSDVE VGKIYEGRVS RLMDFGAFVT ILPGKDGLLH ISQISAERVK
661 NVSDKLSEGD VIRVKVLEVD KQGRVRLSVK AIGNE
//