LOCUS ABA58480.1 542 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 bacterial peptide chain
release factor 3 (bRF-3) protein.
ACCESSION CP000127-1926
PROTEIN_ID ABA58480.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2019"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000276"
/db_xref="InterPro:IPR000795"
/db_xref="InterPro:IPR004161"
/db_xref="InterPro:IPR004548"
/db_xref="InterPro:IPR005225"
BEGIN
1 MSPTELIREI EKRRTFAIIS HPDAGKTTLT EKLLLFGGAI QLAGTVKSRK ASRHATSDWM
61 ELEKQRGISV TSSVMQFPYK DRIINLLDTP GHADFSEDTY RTLTAVDSAL MVIDSAKGVE
121 ERTIKLMEVC RLRNTPILTF INKLDREGQE PIELLDEIER VLGIRCAPLT WPIGMGKRFK
181 GIFHLSHNRI HLFSPTHGGK IKTGEQIQGL DNPRLSELLG NQVEELQEEI ALVQGASHPF
241 DKEAFLAGEQ TPVFFGSAMN NFGVEELLDA YVEYAPSPRA RETATRRVAP KELKFSGFVF
301 KIQANMDPQH RDRIAFLRVC SGSYQKGMKL RHTRLGREVQ IANVLTFMAG EREQAETAWP
361 GDIIGFHNHG TIQIGDTFTQ GEELQFTGIP HFAPELFRRV RLKDPLRTKA LLKGLQQLSE
421 EGATQLFRPL LGNDLILGAV GVLQFDVVAH RLKHEYSVDC GYDSVQVVTA RWVSCNDSRR
481 LEEFRTKAAA HLALDGAGNL TYLAPTRVNL DLTMERWPEV AFHAIREHAL GVEDGNPLVA
541 SL
//