LOCUS ABA58418.1 538 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 AMP-dependent synthetase
and ligase protein.
ACCESSION CP000127-1864
PROTEIN_ID ABA58418.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1956"
/EC_number="5.1.1.11"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000873"
BEGIN
1 MSRIHSANSL VHSLVLDNAL KGPDASALVH GDQTLTYASL GETVEACARG LLALGLASSE
61 RVAIYLPKRP ETVVTLFGAA AAGGVFVPIN PLLKPRQVAH ILRDCNVRVL VTASNRIDFL
121 QDALAECHDL RSLVIVDAPT QTIEKLAQPM AISWERLLSL GTTQQSPGHR RIDSDMAAIL
181 YTSGSTGRPK GVVLSHRNLV AGAQSVAQYL ENNSNDRLLA VLPLSFDAGF SQLTTAFSVG
241 ASVVLMEYLL PKDVIKSITR HGITGITAVP PLWVQLASLA WPPEAADTLR YIANTGGRMP
301 KAATTALRRS LPQTKVFLMY GLTEAFRSTY LPPEEVDKRP DSIGKAIPNV EIQVAREDGS
361 LCLPGESGEL VHRGVLVAMG YWNDPKKTAE RFRPTPGQPP ELPLTEIAVW SGDTVRMDED
421 GFFYFIGRQD EMIKTSGYRV SPTEVEEVLY QAGLVAEAAV VGVLHPKLGQ GIVAIVKPNK
481 DNFDPEDLLA TCRAELPNFM VPLAVIVSEN LPRNTNGKID RRALAMEFEL LFKEQTAP
//