LOCUS ABA58404.1 491 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Polysaccharide biosynthesis
protein protein.
ACCESSION CP000127-1850
PROTEIN_ID ABA58404.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1942"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR002797"
BEGIN
1 MLESKTEPGV RHSIVVTTLN RYAVLVISLV STMVLARLLT PAEIGIFSMA VVFVNLAHSM
61 RDFGVGRYIV QEKELTVDRI RSAFGITLGI AWSMAIVLAI AAPWVADFYG DERVTGILRV
121 LAVNFVLIPF GSVVLSYLNR EMQFTTIFLV GVISEFVRAA SGIWFAWIGL GAMSLAWSAL
181 LGVIATVVLA RILGPSHFIL RPAFCEWRRV MSFGGRATLA TIAFQFQRGA PEVVIGRYLS
241 AAAVGFFSKA LGVIRLFDRT VLSAVSPAIL PHMAAKHRSG ESVAGFYAHG LGLITALAWP
301 CYAFIAIMAF PVVRILFGDQ WDAAVPLARI LAIYAAVDAL YAFTAQALIA VGAVHLLVRL
361 RVATLLATVL ALVLAVSYGL EVVAFAMVFP AVVGLIYSSL LMRSAIGLKG RVYLKATAAS
421 LLITAATVAF PLFYLGMPAA VGQPHWQFFI ISAAGGSAGW MVAVITLRHP IWDELRLLFS
481 QARNRLWPVS S
//