LOCUS ABA58367.1 629 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 membrane protease FtsH
catalytic subunit protein.
ACCESSION CP000127-1813
PROTEIN_ID ABA58367.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1903"
/EC_number="3.4.24.-"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000642"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="InterPro:IPR003960"
/db_xref="InterPro:IPR005936"
/db_xref="InterPro:IPR011546"
BEGIN
1 MANQKPDIEI NKPAKIPFWR RPWFSFLLYG LFVLVSYSTF KTEQEEIPYS QFLRYVQAGQ
61 VQQAVIRKDM IEGTLKPEKK HKGKKTEKPR QFVTVPLWDD PLAVMLEKHG VNYVVRTGGD
121 WLSNLLFNWI LPFAVISFLW IWIGRKVNRG GSFLSLGGNR VRIHPNTLPK VTFDDVAGVE
181 EAKEELREII VFLRDPSLIQ DLGGRMPKGV LLAGPPGTGK TLLARAVAGE ARVPFFNISG
241 SEFIELFVGV GAARARDLFE QARKKAPCII FIDELDAIGR TRAGAVSMGG HDEREQTLNQ
301 LLVEMDGFDP SVGVVVMAAT NRAEILDKAL LRAGRFDRRV LVDKPDLEGR IEILKIHVRA
361 LKLGQDVDLK VVAQRTPGFV GADLANIANE AALHGVRMGH EAITLGDFEA AVDRVIAGPE
421 KKHQILSPEE KRRVAYHESG HTLVAETVPT GEPVHKVSII PRGGGALGYT LQLPVKEKFL
481 ANASELKDQL AILLGGRSAE EIVYGDVSSG AQNDLEKATE IAHGMVCQLG MNEKLGPLTY
541 GKRHQSLYLG VDYGEEKNYS EATAQVIDAE VKKLIEEAHQ RAREILTEQR QILEILAELL
601 EEKEIISGNE VKQVIDNARG ALDKTPFRK
//