LOCUS ABA58215.1 640 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 1-deoxy-D-xylulose-5-phosphate
synthase protein.
ACCESSION CP000127-1661
PROTEIN_ID ABA58215.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1743"
/EC_number="2.2.1.7"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR005474"
/db_xref="InterPro:IPR005475"
/db_xref="InterPro:IPR005476"
/db_xref="InterPro:IPR005477"
BEGIN
1 MASVTSYPLL EQIDSPERLR RLPESDLETL AEELRDFLLH SVARSGGHLA AGLGTIELTI
61 ALHYIFATPE DRLVWDVGHQ AYPHKVLTGR RERLGTIRQA GGLAPFPSRH ESPYDTFGVG
121 HSSTSISAAL GMAIAANEKG EKRKTVAIIG DGGMTAGMAY EALDHAGALG ADLLVILNDN
181 EMSISPNVGA ISSYLTRLLS GRVYSTVREG SKKVLERMPP PMWELARRTE EHVKGMVAPG
241 TLFEEMGFNY FGPIDGHDLS SLIRTLRNLH KLTGPRLLHI VTCKGKGYTL AEENPVTYHG
301 VTPFDPKVGI QQGPQKPSSA MSYTQVFSQW LCDMAAQDGL LVGITPAMRE GSGLVKFSEC
361 FPERYFDVAI AEQHSVTLAA GMACDGLKPV VAIYSTFLQR AYDQLIHDVA LQNLPVLFAI
421 DRAGVVGPDG PTHAGSFDLT YLRCIPNLVV MAPADENECR QMLYTGFLLN QPAAVRYPRG
481 KGPGVAVEAS MTALPLGKAE LKRKGRGIAI LAFGATVAPA LEAAEKLDAT VVNMRFVKPL
541 DEDLVLEMAM NHELLVTVED NVIAGGAGSA VSECLAYHGV SVPLLLHGLP DNFLEHGSRE
601 ALLEQCHLNA EGILQRVKTY RARLPKSKAS VVSSAAGTHG
//