LOCUS ABA58079.1 1554 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 glutamate synthase (NADH)
large subunit protein.
ACCESSION CP000127-1525
PROTEIN_ID ABA58079.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1604"
/EC_number="1.4.1.14"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000583"
/db_xref="InterPro:IPR002489"
/db_xref="InterPro:IPR002932"
/db_xref="InterPro:IPR003009"
/db_xref="InterPro:IPR006982"
BEGIN
1 MSDGTLPRKQ GLYDPHNEHD SCGVGFVANV KGHKSHNLIR KGLQILKNLT HRGAVGADPR
61 AGDGAGILLQ MPDQFLQEEC ARQGINLPPV GEYGVGMLFL PQGAEARATC EELISHYIDA
121 EGQTLLGWRD VPTDNTQLGE SVKAVEPIIR QVFIGHGDNT SSGDPFERKL FVIRKQIENA
181 VRELDQADQA TFSIPSLSSR ILVYKGMLLA SQVPSYFTDL TDERMITALS LVHQRFSTNT
241 FPSWDLAQPF RMIAHNGEIN TLRGNINWMA ARRHAMTSKL LGDDLKKLWP LIAEGQSDSA
301 CFDNALELLV AGGYPLAHAM MLLIPEAWAG NPLMEAKQRA FYEYHAALME PWDGPAAMAF
361 TDGRMIGATL DRNGLRPARY LITNDDLVAM ASEMGVLDIP QERIIKKWRL QPGKMLLIDL
421 EAGRIIDDDE LKRKLAEAEP YQQWLDQTQI RIEHLPAETG PMAPDPATLL DRQQAFGYTQ
481 EDLKFLLTPM AVTGQEAVGS MGADEPLAVL SNRAIPLSNY FKQRFAQVTN PPIDPIREEL
541 VMSLVSLIGP RPNLLGHHHQ AGAHKRLEVS QPVLTNTDLE RIRRIEDHTG GAFRTHTLTI
601 CYPVTEGAAG MEAALGKLCR SAEQAVHKGY NILILSDRGV DIDHVAIPAL LATSAVHHHL
661 VQTGLRTETG LVVETGAARE VHHFAVLAGY GAEAINPYLA FETLSALRQQ LPEELNEEEI
721 QKRYIKAVGK GLLKIMSKMG ISTYQSYCGA QIFDGVGLSH NFVEKYFTGT VSTIEGAGLS
781 EIAEEAFRWH RNAYSDVPLY RHGLDAGGYY AYRLRGEDHM WTFDTISKLQ HASRANEAKT
841 YEEYAQLVNQ QNKRLLTLRG LLEFRFAANP LPLEDVEPAK DIVKRFATGA MSFGAISHEA
901 HTTLAIAMNR IGGKSNTGEG GEEAERFKPL PNGDSMRSAI KQVASGRFGV TAEYLVNADD
961 IQIKMAQGAK PGEGGQLPGH KVDATIAQVR HSTPGVGLIS PPPHHDIYSI EDLAQLIFDL
1021 KNVNPQARIS VKLVSEVGVG TVAAGVSKAH ADHVTIAGHD GGTGASPLTS IKHAGLPWEI
1081 GLAETQQTLV LNRLRGRIAV QVDGGIRTGR DVVIGALLGA DEFGFATAPL IVAGCIMMRK
1141 CHLNTCPTGV ATQDPVLRKL FTGKPEHIVN YFFLVAEEVR QIMAQLGFRC FDEMIGRLDV
1201 LDTRQALDHW KAKGLDFSRI LYHPTTDPEV PLYNRERQDH GLDEVLDRWL IAQAQPALER
1261 QEAVQIETPV GNTDRTVGAM LSGEVARRYG HKGLPQDTIY IRTEGTAGQS FGAFLAHGIS
1321 LELIGEANDY VGKGLSGGRL VITPPPECPI VPEENIIIGN TVLYGAISGE CYFRGVAGER
1381 FAVRNSGVTA VVEGVGDHGC EYMTGGVVVV LGRTGRNFAA GMSGGIAYVL DEAGNFEQRC
1441 NLAMVELEPI AEEDEALEHL EHQGGDLETH GRVDISHHIS RFDGQRLRNL IEKHQHYTHS
1501 GRARQILENW SAYLPRFVKV MPVDYRRALQ EMEHAQAARH TIPVMQQEAL DQYG
//