LOCUS ABA58038.1 639 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Acyl-CoA dehydrogenase protein.
ACCESSION CP000127-1482
PROTEIN_ID ABA58038.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1555"
/EC_number="1.3.8.1"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR006090"
/db_xref="InterPro:IPR006091"
/db_xref="InterPro:IPR006092"
BEGIN
1 MAKTPFGQLK DISEADREQI EAAQEMLGPE PETMGFVKNL FWGHFREELL FPFPEVSLEE
61 ASRCDQLLTE LDEYLRNEHP AIAIDQEQKI PASVVKRLFN MGIMGMIVPK KYGGGGFGIT
121 SYNRVLSRIG QRCGSTAVMV SAHQSIGCGA IILFGTDAQK KRFLPAMAQD HLSAFCLSEP
181 NVGSDASGQE TRCKLSEDGQ FYILNGEKKW ASSAALSGLF TVLAKQKIQD PRTGKEKDQV
241 TALICTPDMA GIDIYSRNRS KCGIRGTWQA RIRFRDVKVP RENLLHQEGK GLNVALTCLD
301 YGRCTLAAGM VGAAATAYEQ AVKWAQYRYQ FGRPLADFEQ IQAKIASMAA NCYAMEAMLY
361 MTTGMLDRHD EDIMLETGIC KVFCSEIGYR VVDDALQIMG GESYMTENEV ERLWRDSRIN
421 LIVEGANEVM LSFIFGYGSK QLGEALLNIA KNPMKHLGQA LRISAELFLG IKKQRPRITR
481 LHPSLAPLQG KLENYTQQLS HETKRMFHKH REKLITRQML QARLSWAAIW IHAMSCSLSY
541 LDRALRLEKK REQIDSQTAL VEHFFNLASR AIEQNFQALK NNADDTLPAA AKAALRYAHQ
601 LPNAHYVLPE KTPIKGARGT GRQPDQTHIQ QFGSGWLTL
//