LOCUS ABA57947.1 1103 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Peptidase M28 protein.
ACCESSION CP000127-1391
PROTEIN_ID ABA57947.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1459"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR002933"
/db_xref="InterPro:IPR006025"
/db_xref="InterPro:IPR007484"
BEGIN
1 MYRQKILSFL VFGLVVLASG TASAQIHHQL HINLDPDSHR LTAVDTLTLP KEISSPVTFR
61 LHSGLQPQAN NPEVRLRRVR KTQFTEDYAV DLPPGVRQFT LEYSGEIFHP IAPISEEYAR
121 SFSASPGLIA PEGVFLAGPS YWYPHFGEGM VTFSLTTQLP AGWHSVSQGK RSSPPEQEGS
181 TEETWTMDHP QEEIYLIAGS FTPYREQAGQ VETLAFLRQP DPALARKYLD ATAQYIEMYR
241 QLIGPYPYQK FALVENFWET GYGMPSFTLL GSRVIRFPFI LRSSYPHEIL HNWWGNGVYV
301 DYDSGNWAEG LTSYLADHLL KEQQGQGAQY RRETLQKYAD YVREGRDFPL TEFRSRHSAA
361 TQAVGYGKTL MLFHMLRQQL GDSAFIQGLQ HLYRQHRFQV TSFQEVAETF NQVSEQPLRA
421 FFKQWAERTG APSLRIREAH AQPLDEGYLL TATIEQLQPG KPYQLDLPLV IYLEDAEEVY
481 QTRLSMEKKT HSLKLQLPAR PLRLEIDPQF DVFRRLHHNE IPPALSQAFG AERALAVLPS
541 QAPQAVREGY AAMARSWQRG RENLVITTDA ELDALPTDRA VWLFGWENRF RSQFNEALSD
601 YAYQADKNGL SLEKNKLQRQ QHSAVVVTRP RNNPDQALAW IATDNVAAMP GLARKLPHYG
661 KYSYLGFTGA EPENSLKGQW PVVNSPMSVL LAEDSPPLQA ELPPRKPLAE LPPLFKAQRM
721 MQDIAYLADP KLAGRGLGTP ELDQAAQYIA DKFQAAGLKP GGDEGSYYQT WTATAGEPER
781 TITLRNVVGL SPGARPELPP VVVGAHYDHL GRGWPDVHQG DEGKIHPGAD DNASGIAVML
841 ELARILGPQW QPERTVAWVA FTGEEAGKLG SVHYVQRLGD SPAKTTMAMI NLDAVGRLHD
901 GELMVLAADS AREWAHIFRG AGFVTGVPIQ TVAQDIGSSD QTSFLNAGIP AVQLFTGPHG
961 DFHRPTDTPD KIDSAGLTKI AAVLKEAVAY LASRPDPLHG QSVAPGEEAQ DSSRQGRRVG
1021 LGTIPDFGWT GTGVRISGVT PDTPAEAAGL QKDDIIIRLN DKTIDTLADF AGVLRALKAG
1081 DSLTIEFLRD QQSRTVTTQV VAR
//