LOCUS ABA57835.1 1047 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Heavy metal efflux pump protein.
ACCESSION CP000127-1279
PROTEIN_ID ABA57835.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1340"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR004763"
BEGIN
1 MFERLLRSSI EHRGLVMLAM VGLILLGIYN FQRLSIDAVP DITNIQVQIN TAAPGYSPLE
61 TEQLITFPVE LAMLGAPRLQ ETRSISKYGL SQVTVIFEEG TDIYFARQQI NERIQQAKGQ
121 LPSGIEPRMG PIATGLGEIV LWTMEAEPGA RQPDGSPVTS TYLRTLLDWV IRPQLLTLPG
181 VTEVNSIGGY KKQYHVTPSP EKLIAYGLSF RDVMTALAEN NQMKGAGYIE HHGEQFLIRI
241 PGRVYTLEEI RNIRVGTYQG IPILIKDLAE VLLGKELRTG VATRDGQEAV IGTAFMLMGE
301 NSRAVAQAVG EKLTEANRSL PEGVEAEIFY DRTNLVDKAV VTVRNNLVEG AALVIAVLFF
361 LLGNIRAALI TAMVIPLSML FAITGMVSEG VSANLMSLGA IDFGIIVDGA VVIVENSVRH
421 LAEEQQRRGR TLTLSERLKV VYESSEEARR AILFGQMIIM VVYIPIFALS GVEGKMFHPM
481 AQTVIMALFG AMILSITFVP AAVALFIGKR VSEKENFFMR WGSKAYLPTL DFALHHRTLM
541 VTSAVVIVAL SGLLATRLGT EFVPSLDEGD IALQVLRTPG TGLQQSIAMQ EKVEQAFNTF
601 PEVETVAARI GTAEVATDVM GPNISDIYIM LKPREEWPDP DRPKEDLIEA MSQRIARLPG
661 GKYEFSQPIE LRFNELLSGV KADVAVKVFG DNRSVLLETA EQIAVVLRTV PGASDVRVEQ
721 VTGLPVLTVE IKRPELARYG LNVADIQRTV EAAMGGVAVG KIYQGDRRFD LVVRLPERYR
781 TDVDALRRLP ILIPPSLGAR AGAAQIPAPA YIPLSTIAEV QISPGPNRIS RENSKRRVTT
841 TFNVRGRDMG SVVAEAQAKI QARVEIPPGY WIDWGGQFEL MTEAAERLSL VVPVALLLIF
901 IFLYSTFGNL KDGLLVFTGV PFALTGGVLS LWLREIPLSI SAGVGFIALS GVAVLNGLVM
961 ITFIRMLRDQ GLSLEEAIRQ GALTRLRPVL MTALVASLGF VPMALATSTG AEVQRPLATV
1021 VIGGIISSTL LTLLVLPVLY RIIHYRE
//